Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0498 ATGGGCGCAAGTCGAAAGCTTCAGGGCGAGATAGATCGCGTTCTCAAGAAGGTCCAAGAAGGTGTTGAGGTCTTCGATAGTATCTGGAACAAGGTTTACGATACTGACAATGCTAATCAGAAGGAGAAATTTGAGGCAGACCTGAAGAAGGAGATTAAGAAGCTCCAGAGGTATAGAGACCAAATTAAGACTTGGATACAGTCTAGCGAGATCAAGGATAAGAAGGTTAGTGCCTCTTATGAGCAGGCTCTGATGGATGCTCGGAAGCACATCGAGCGTGAAATGGAAAGATTTAAGATATGTGAAAAGGAAACTAAGACCAAAGCGTTCTCCAAAGAAGGCTTGGGCCAACAGCCTAAAACTGATCCAAAGGAGAAGGCTAAATCAGCGACAAGGGATTGGTTGAATAATTTGGTCGGAGAATTAGAATCTCAAATTGATAACTTTGAAGCTGAGCTTGAAGGGCTTTCTGTCAAAAAGGGAAAAAGCAGACCACCTAGATTGACACATCTAGAGATGTCAATTGCTCGACACAAGGCTCATATAAAAAAATGTGAGTTACTCTTGAGGCTGCTAGACAATGATGAATTAAGTCCTGAGCAGGTTAACGATGTGAAATATTTCTTGGAAGACTATGTGGAGCGTAATCAGGAGGACTTTGATGAATTCAGTGATGTCGATGATCTATACAGTTCATTACCTTTAGACAAGGTGGAGTCTCTCGAAGAACTTGTCACAATTGGTCCACCTGCTATTGCTAAGGTTGCACTTGGTCTTAGCTTGAAGACATCTTTAGCTGCATCAGCTTCACAAACATCTGAACAAGCTGATGACACTGCTTCCCAGGATAGCAATTCTGATCCTGTAGTCAGAACGCCACCTTCTAAAAGTAGTGGAATCAGTTCTGCTATGTCGACACCAGCTGGAAACCATGCTACTCCTGTTTCTTTGAATGTTTCGTCTCAGAACTTGTCTGGCGCAACTGCTGTAGCATCGGTCCTCCCTGGTTCAAATTCTGTTCAGACTACTCTGGAGAATAGTGGTGCTACTAATTCTTCATCTGTAAATCCGCCTATCTCTGTGAAAGAAGACGAGGTTAATGGCTTCCCTGGCCGGAGAGCATCTCCATCACTTTCTGATGCTGCACATGCGAGAGGCATCAGTAGAAACAGCCTACCAAATCAAGTGACATCTGGTATCCCTCTTGCTTCCAGCAATGGGGCCCTTGGTTCGGTCCCTTCAGCCTCTGATATAACAAAGAGGAACTTACTGGGAGCTGATGACAGGTTTGGAAGTAGTGGGATAGGGCAGCCTCTTCTATCACCCCTAAGTAATAGAATGATGTTGCCTCAGGCTTTGAAGGCTAACGATGGAACCGGTTCAGTTGACCCTAATAATGTTAATGAGGCTACAGCTGTATCTGGGAGAGTTTTTTCCCCTTCTGGTGTTCCTGGCATGCAGTGGAGACCAGGAAGTCCTTTCCAGAACCAGAATGAGACGGGTCAACTTCGTGGAAGAACTGAAATAGCACCTGATCAGAGAGAAAAGTTTCTGCAGAAGTTTCAGCAAGTGCAGCAACAAGGGCATAGTACCCTTCTTGGTATGCCTTCTCTTGCCGGTGGAAGTCATAAACAGTTTTCTGCTCAGCAGCAAAATCCTCTCTTGCAGCAGGCACCAGGTCTCAGTAGCATTTCATCCACCTCATTACAGCAGCCATCCAATTCTATCCTTTCTGCATCTAGTCAACAGCCAATGATATCGAGTGTTTCTCAAGATTCTGATGGCAATTCTAAAGTTGAAGAGCATCAGCAACAACAGAATACTCCTGATGATTCAGCGTCTGAATTTACTTCCAGTAATGGGCTTGGCAAGAATCTTCTAAATGAAGAGGATTTAAAATCCACATATATTGTAGATTCTCCTCAGGCAGGAGTATCTGGTTCTCTTACTGAGCCTTCTCAGAGCTCCAGAGATGCTGATTTCTCTCCTGGTCAACCTTTACAGTCCAATCAGCCTTCTGGTAACCTTGGTGTTATTGGAAGAAGAAGTGTTGCCGATTTTGGAGCCATTGGTGATAATCTTAGTGGAACAAATGTCAATTCTGGCGGAGGGCGTGACCATTTATTTAATTTGCAGATGCTTGAAGCAGCTTACTACAAACTTCCACAACCCAAAGACTCAGAACGTCCAAGGACTTATACTCCCAAGCACCCAGCAATGACACCTCCAAGTTATCCTCAAGTACAGGCCACCATTGTCAGTAATCCCGCCTTCTGGGAGAGAGTAGGTCTTGAACCATATGGCACTGACACCCTGTTCTTTGCATTTTATTATCAACAGAACACTTATCAACAATATTTGGCTGCAAAAGAACTAAAGAAGCAGTCTTGGAGATATCACAGAAAATATAACACATGGTTTCAGAGACATGAAGAGCCAAAAGTCGCTACTGATGAATTTGAGCAGGGAACATATGTATACTTCGATTTTCATATTGCAAATGATGACCTGCAACATGGATGGTGTCAAAGAATCAAGACCGAGTTCACTTTTGAGTATAATTATCTTGAAGATGAGCTTAGTGTATAG 2589 0.4357 MGASRKLQGEIDRVLKKVQEGVEVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALMDARKHIEREMERFKICEKETKTKAFSKEGLGQQPKTDPKEKAKSATRDWLNNLVGELESQIDNFEAELEGLSVKKGKSRPPRLTHLEMSIARHKAHIKKCELLLRLLDNDELSPEQVNDVKYFLEDYVERNQEDFDEFSDVDDLYSSLPLDKVESLEELVTIGPPAIAKVALGLSLKTSLAASASQTSEQADDTASQDSNSDPVVRTPPSKSSGISSAMSTPAGNHATPVSLNVSSQNLSGATAVASVLPGSNSVQTTLENSGATNSSSVNPPISVKEDEVNGFPGRRASPSLSDAAHARGISRNSLPNQVTSGIPLASSNGALGSVPSASDITKRNLLGADDRFGSSGIGQPLLSPLSNRMMLPQALKANDGTGSVDPNNVNEATAVSGRVFSPSGVPGMQWRPGSPFQNQNETGQLRGRTEIAPDQREKFLQKFQQVQQQGHSTLLGMPSLAGGSHKQFSAQQQNPLLQQAPGLSSISSTSLQQPSNSILSASSQQPMISSVSQDSDGNSKVEEHQQQQNTPDDSASEFTSSNGLGKNLLNEEDLKSTYIVDSPQAGVSGSLTEPSQSSRDADFSPGQPLQSNQPSGNLGVIGRRSVADFGAIGDNLSGTNVNSGGGRDHLFNLQMLEAAYYKLPQPKDSERPRTYTPKHPAMTPPSYPQVQATIVSNPAFWERVGLEPYGTDTLFFAFYYQQNTYQQYLAAKELKKQSWRYHRKYNTWFQRHEEPKVATDEFEQGTYVYFDFHIANDDLQHGWCQRIKTEFTFEYNYLEDELSV 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0498 862 PIRSF NOT_su_3_5 1 862 IPR012270 GO:0006355|GO:0030015
Lele06g0498 862 MobiDBLite consensus disorder prediction 639 677 - -
Lele06g0498 862 MobiDBLite consensus disorder prediction 724 745 - -
Lele06g0498 862 Gene3D - 704 857 IPR038635 -
Lele06g0498 862 PANTHER CCR4 NOT-RELATED 24 859 IPR040168 GO:0030015
Lele06g0498 862 MobiDBLite consensus disorder prediction 559 625 - -
Lele06g0498 862 MobiDBLite consensus disorder prediction 270 317 - -
Lele06g0498 862 Coils Coil 132 159 - -
Lele06g0498 862 MobiDBLite consensus disorder prediction 637 678 - -
Lele06g0498 862 MobiDBLite consensus disorder prediction 109 129 - -
Lele06g0498 862 FunFam CCR4-NOT transcription complex subunit 3 isoform X1 702 857 - -
Lele06g0498 862 Pfam Not1 N-terminal domain, CCR4-Not complex component 4 236 IPR007207 GO:0005634|GO:0006355
Lele06g0498 862 Pfam NOT2 / NOT3 / NOT5 family 718 856 IPR007282 GO:0006355
Lele06g0498 862 MobiDBLite consensus disorder prediction 341 360 - -
Lele06g0498 862 MobiDBLite consensus disorder prediction 341 399 - -
Lele06g0498 862 Coils Coil 41 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0498 Lele-ChrLele06 3028009 3036105 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0498 06 3028009 3036105 Lele06g0498 06 3028009 3036105 ECH
Lele06g0498 06 3028009 3036105 Lele07g0710 07 4016219 4024621 hybridization
Lele06g0498 06 3028009 3036105 Lele08g0507 08 3081512 3091200 hybridization