Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0676 ATGAAACCACGTGGCCACTCAGCTGCCCGTCGCCTCTACCAACCCATCCCTCCCACCCTGCTCGTATTTAAACCCTTCTCGCACCACTTCTACACCGCAGACCAGGACCTTCCATTCCTTCATTGCTTCCCCCACTACTCAACACTCCTCTCTTCTTCATCTTCCTCGAACTATTTCAAGATGGTCTCCGTCGACGAGATCCGCAACGCCCAGCGTTCCGGTGGCCCCGCCACCATCCTCGCCTTCGGCACCGCCACCCCCTCTAACTGTGTCATCCAAGCTGACTACCCTGACTACTACTTTCGCATCACTCAGAGCGAGCACATGACAGATCTCAAAGAGAAGTTCAAGCGCATGTGCGAGAAATCTATGATAAAGAAGCGTTACATGCACTTGACGGAGGAGATATTGAAGGAGAACCCCAACATGTGCGCTTACATGGCTCCGTCTTTGGACGCTCGTCAGGACATGGTGGTGGTTGAGGTACCTAAGCTTGGCAAAGAGGCCGCCGTCAAGGCCATTAAGGAGTGGGGTCAGCCCAAGTCCAAGATTACCCACCTCGTCTTCTGTACAACTTCTGGGGTGGACATGCCCGGAGCCGATTATCAGCTCACCAAGCTTCTCGGCCTCAGACCCTCCGTCAAGCGGCTAATGATGTACCAGCAAGGCTGCTTCGCCGGAGGCACTGTCCTTCGCCTCGCCAAGGACCTCGCCGAGAACAACAAGGGAGCCCGTGTTCTCGTCGTCTGCTCTGAGATCACCGCCGTCACTTTCCGTGGGCCTTCAGACACTCACCTCGACTCCCTTGTGGGGCAGGCACTCTTCGGCGACGGCGCTGCTGCCATGATCATCGGCGCAGACCCCGACACCTCCATCGAGCGCCCGATCTTCGAGATGGTGTCGGCGGCGCAGACCATCTTGCCCGACTCCGACGGAGCCATCGACGGGCACCTGCGGGAAGTGGGACTCACGTTCCACTTGCTGAAGGACGTTCCCGGGATCATCTCGAAGAACATTGAGAAGAGCTTGGTGGAGGCGTTTACCCCCATTGGCATCAACGACTGGAATTCCATATTCTGGATCGCACACCCCGGTGGTCCGGCTATTCTGGATCAGGTGGAGGACAAGCTGGGGTTGAAAGAAGAGAAGCTGGCAGCGACCAGGCACATTCTGAGCGAGTACGGGAACATGTCAAGCGCGTGTGTTATCTTCATATTGGATGAGGTGAGGAAGAGGTCGATGAAAGAAGGGAAGGCGACCACCGGACAAGGGTTGGAGTGGGGCGTCTTGTTCGGGTTCGGGCCGGGTCTGACGGTGGAGACAGTGGTGTTGCACAGTGTTCCCGTGTAA 1350 0.5696 MKPRGHSAARRLYQPIPPTLLVFKPFSHHFYTADQDLPFLHCFPHYSTLLSSSSSSNYFKMVSVDEIRNAQRSGGPATILAFGTATPSNCVIQADYPDYYFRITQSEHMTDLKEKFKRMCEKSMIKKRYMHLTEEILKENPNMCAYMAPSLDARQDMVVVEVPKLGKEAAVKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAMIIGADPDTSIERPIFEMVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGIISKNIEKSLVEAFTPIGINDWNSIFWIAHPGGPAILDQVEDKLGLKEEKLAATRHILSEYGNMSSACVIFILDEVRKRSMKEGKATTGQGLEWGVLFGFGPGLTVETVVLHSVPV 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0676 449 Gene3D - 296 449 IPR016039 GO:0016746
Lele07g0676 449 SUPERFAMILY Thiolase-like 295 446 IPR016039 GO:0016746
Lele07g0676 449 Pfam Chalcone and stilbene synthases, N-terminal domain 65 288 IPR001099 -
Lele07g0676 449 CDD CHS_like 76 444 - -
Lele07g0676 449 Pfam Chalcone and stilbene synthases, C-terminal domain 298 448 IPR012328 -
Lele07g0676 449 PANTHER HYDROXYMETHYLGLUTARYL-COA SYNTHASE 64 447 IPR011141 GO:0009058|GO:0016747
Lele07g0676 449 SUPERFAMILY Thiolase-like 61 293 IPR016039 GO:0016746
Lele07g0676 449 FunFam Chalcone synthase 2 60 295 - -
Lele07g0676 449 ProSitePatterns Chalcone and stilbene synthases active site. 216 232 IPR018088 GO:0009058|GO:0016746
Lele07g0676 449 Gene3D - 52 295 IPR016039 GO:0016746
Lele07g0676 449 FunFam Chalcone synthase 1 296 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0676 Lele-ChrLele07 3848702 3850137 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g0676 07 3848702 3850137 Lele07g0676 07 3848702 3850137 ECH
Lele05g0643 05 3793173 3794715 Lele07g0676 07 3848702 3850137 hybridization
Lele06g0467 06 2850035 2851305 Lele07g0676 07 3848702 3850137 hybridization