Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0643 ATGGTTTTGGTAGAAGAACTTGAACAGTTTTCACATGTTAGAAATACATCCCAGGCCCTTCCATTCCTTCATTGCTTCCCCCACTACTCAACACTCCTCTCTTCTTCATCTTACTTGAACTATTCCAAGATGGTCTCCGTCGACGAGATTCGCAACGCCCAGCGTTCCCGTGGCCCCGCCACCATCCTCGCCTTCGGCACCGCCACCCCCTCTAACTGTGTCATCCAAGCTGACTACCCTGACTACTACTTTCGCATCACTCAGAGCGAGCACATGACAGATCTCAAAGAGAAGTTCAAGCGCATGTGCGAGAAATCTATGATAAAGAAGCGTTACATGCACTTGACGGAGGAGATATTGAAGGAGAACCCCAACATGTGCGCTTACATGGCTCCGTCTTTGGACGCTCGTCAGGACATGGTGGTGGTTGAGGTACCTAAGCTAGGCAAAGAGGCCGCCGTCAAGGCCATTAAGGAGTGGGGTCAGCCCAAGTCCAAGATTACCCACCTCGTCTTCTGTACAACTTCTGGGGTGGACATGCCCGGAGCCGATTATCAGCTCACCAAGCTTCTCGGCCTCAGACCCTCCGTCAAGCGGCTAATGATGTACCAGCAAGGCTGCTTTGCCGGAGGCACTGTCCTTCGCCTCGCCAAGGACCTCGCCGAGAACAACAAGGGAGCCCGTGTTCTCGTCGTCTGCTCTGAGATCACCGCCGTCACTTTCCGTGGGCCTTCAGACACTCACCTTGACTCCCTTGTGGGGCAGGCCCTCTTCGGCGACGGCGCTGCGGCCATGATCATCGGCGCCGATCCCGACACCTCCATCGAGCGCCCAATCTTCGAGATGGTGTCGGCGGCTCAGACCATCTTGCCCGACTCCGACGGAGCCATCGACGGGCACCTGCGGGAAGTGGGTCTCACGTTCCACTTGCTGAAGGACGTACCCGGGATCATCTCGAAGAACATTGAGAAGAGCTTGGTGGAGGCGTTTACCCCCATTGGCATCGACGACTGGAATTCCATATTCTGGATCGCCCACCCCGGTGGTCCGGCGATTCTGGATCAGGTGGAGGCCAAGCTGGGGCTGAAAGAAGAGAAGCTGGCAGCGACCAGGCACATTCTGAGCGAGTACGGGAACATGTCAAGCGCGTGTGTTATCTTCATATTGGATGAGGTGAGGAAGAGGTCGATGAAAGTAGGGAAGGCGACCACCGGAGAAGGGTTGGAGTGGGGCGTCTTGTTCGGGTTCGGGCCGGGTCTGACGGTGGAGACAGTGGTGTTGCACAGTGTTCCCGTGTAA 1299 0.5612 MVLVEELEQFSHVRNTSQALPFLHCFPHYSTLLSSSSYLNYSKMVSVDEIRNAQRSRGPATILAFGTATPSNCVIQADYPDYYFRITQSEHMTDLKEKFKRMCEKSMIKKRYMHLTEEILKENPNMCAYMAPSLDARQDMVVVEVPKLGKEAAVKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAMIIGADPDTSIERPIFEMVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGIISKNIEKSLVEAFTPIGIDDWNSIFWIAHPGGPAILDQVEAKLGLKEEKLAATRHILSEYGNMSSACVIFILDEVRKRSMKVGKATTGEGLEWGVLFGFGPGLTVETVVLHSVPV 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0643 432 Gene3D - 279 432 IPR016039 GO:0016746
Lele05g0643 432 Gene3D - 35 278 IPR016039 GO:0016746
Lele05g0643 432 FunFam Chalcone synthase 1 279 431 - -
Lele05g0643 432 PIRSF PKS_III 45 432 IPR011141 GO:0009058|GO:0016747
Lele05g0643 432 Pfam Chalcone and stilbene synthases, N-terminal domain 48 271 IPR001099 -
Lele05g0643 432 SUPERFAMILY Thiolase-like 278 429 IPR016039 GO:0016746
Lele05g0643 432 CDD CHS_like 59 427 - -
Lele05g0643 432 PANTHER HYDROXYMETHYLGLUTARYL-COA SYNTHASE 47 430 IPR011141 GO:0009058|GO:0016747
Lele05g0643 432 ProSitePatterns Chalcone and stilbene synthases active site. 199 215 IPR018088 GO:0009058|GO:0016746
Lele05g0643 432 SUPERFAMILY Thiolase-like 44 276 IPR016039 GO:0016746
Lele05g0643 432 Pfam Chalcone and stilbene synthases, C-terminal domain 281 431 IPR012328 -
Lele05g0643 432 FunFam Chalcone synthase 2 43 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0643 Lele-ChrLele05 3793173 3794715 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0643 05 3793173 3794715 Lele05g0643 05 3793173 3794715 ECH
Lele05g0643 05 3793173 3794715 Lele07g0676 07 3848702 3850137 hybridization