Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0666 ATGCTAAACGTTCATCTGGTTCCTCACACCCACGACGACGTGGGTTGGTTCAAGACTGTCGATAAGTACTACGTTGGCTCTGATAATTCCATTCAGGGAGCTTGTGTTCAAAATGTATTAGACTCCTTAGTTCCTTCCCTGTTGGGTGACAGGAATCGGAAATTTATCTACGCTGAGATGCTTCCTGCAAATTTCGCTGGTATTTGCTTCATCAATGCAGGCTGTTTTCCAGCGATGTGGAGGGAACAGAGTGAAGCTGTTAAGCACATAGTTAAGCAACTTGTCAGTTCGGATCAATTAGAGTTCATGGCAGCAACACGTTACATGGACATGATTGATCAGACAACAATGGGCCATCGGTTCCTGAAAGAGGAGTTTGGCGTGACTCCTAGGATTGGTCGGCAAATTAATCCCTTTGGACATTCTGCTGGGCGGGCATACTTATTGGGATCTGAAATTATCAAGATAGAGCTAAGCGAAAAAATGAAAAGAGTCTTGAGGTTATCTGGCAGGGAGGTAAGAGCCTTGGCTCTTCTGCCCAGGTGA 546 0.4542 MLNVHLVPHTHDDVGWFKTVDKYYVGSDNSIQGACVQNVLDSLVPSLLGDRNRKFIYAEMLPANFAGICFINAGCFPAMWREQSEAVKHIVKQLVSSDQLEFMAATRYMDMIDQTTMGHRFLKEEFGVTPRIGRQINPFGHSAGRAYLLGSEIIKIELSEKMKRVLRLSGREVRALALLPR 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0666 181 Pfam Glycosyl hydrolases family 38 N-terminal domain 3 151 IPR000602 GO:0004559|GO:0006013
Lele07g0666 181 SUPERFAMILY Glycoside hydrolase/deacetylase 1 150 IPR011330 GO:0005975
Lele07g0666 181 Gene3D Glycoside hydrolase 38, N terminal domain 2 155 IPR027291 -
Lele07g0666 181 PANTHER ALPHA-MANNOSIDASE 1 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0666 Lele-ChrLele07 3799113 3800380 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0666 2 153 Glycoside Hydrolase AT5G13980 60.870 4.04e-60 199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0635 05 3737856 3738919 Lele07g0666 07 3799113 3800380 hybridization
Lele06g0455 06 2781211 2792966 Lele07g0666 07 3799113 3800380 hybridization