Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0657 ATGAATTACTTTCCGGAGGAGGTATTAGAGCACGTGTTCAACTTCGTGACGTCCCACCGGGACCGGAACGCGGTGTCTCTGGGGTGCAAGACGTGGTACAGAGTAGAAAGATGTAGCCGGCAAAAGGTCTTCATAGGGAACTGTTACTCGATCAGCCCAGAGAGGGTGATCCAGATGTTTCCTAGACTTAAATCCCTGACTCTGAAGGGAAAGCCTCATTTTGCAGACTTCAATCTTGTTCCCCATGATTGGGGAGGCTTTGTTTACCCTTGGATTGAAGCGCTGGCGAAGAACCGGATGGGATTGGAGGAGCTTAGGATGAAGAGGATGGTGGTCTCGGATGAGAGCCTGGAGCTACTTTCCCGTTCCTTCTTGAATTTCAAGTCTTTAGTTCTTGACAGCTGTGAAGGGTTCACCACCGATGGCCTGGCAGCGGTAGCTGCAAATTGCAAGTTTCTTAGAGAGCTGGACCTGCAAGAGAATGAAATTGAGGATCTGAAAGGCCAATGGCTAAGCTGCTTTCCTGATACTTGTACATCACTCGTCTCTCTCAATTTTGCTTGTCTCAAAGGAGAGATCAATTTGGGAGCTCTTGAAAGGCTTGTGGCCAGATCTCCTAACCTCAAGAGCTTAAGGTTAAATCCTGCTGTGCCCCTTGACACCCTCCAAAGGATATTGATGCGAGCACCTCAGCTAGTTGACCTAGGTACTGGATCTTTTGTTCATGATCCAGATTCTGAGACATATGCCAAGCTCAAGAGTACCATTTTAAAGTGTAAATCAATAACCAGTTTGTCGGGTTTTTTGGAGGTTTCTCCTCGCTGCCTTCGTGCCATATATCCTATTTGCTCGAACTTGACCTCCTTGAATCTAAGCTATGCAGCAGGGATTGAGGGTAAAGACATGAGAAAGCTAATTCACCACTGTGGGAAACTTCAGCGATTATGGATACTGGATTGCATTGGAGACAGAGGGCTAGATGTTGTAGCTGCCACATGTAAAGATTTGCAAGAATTGAGGGTTTTTCCATGTGTTCCCTTCAGGCCTGGGTCTGGAGCTGTAACAGAAAAAGGACTCGTTGCTATATCATTGGGTTGCCCCAAGCTTCACTCACTGCTTTACTTTTGCCAACAGATGACTAATGCTGCCCTCATAACAGTGGCGAAGAACTGCCCAAATTTTATCCGCTTTAGGTTGTGCATCCTGGAGCCGACGAAACCTGACCCGGACACATTGCAGCCACTAGATGAAGGTTTTGGGGCAATAGTACAGTCTTGCAGGCGAATCAAGCGGTTATCACTCTCTGGTTTGTTGACTGATAAAGTCTTCCTATACATAGGGATGTATGGTGAGCAGCTGGAAATGCTGTCTATTGCATTTGCAGGAGAAAGTGACAAGGGGATGCTATATGTGCTGAATGGATGCAAGAAGCTTAGAAAGCTTGAGATAAGAGATTGCCCCTTCGGCAACACTGCACTTCTAACGGACGTAGGGAAGTATGAATCAATGCGATCCCTTTGGATGTCGTCCTGCGAAGTGACCCTTGGAGCCTGCAAGTCACTGGCTAAGAAGAGGCCAAGGCTAAATGTGGAGATCATAAATGAGAATGAACAGGAAGATTGTAGTTTGGAGGATGGGCAGAGAGTAGAGAAGATGTACCTGTATCGAACTTTAGTTGGGAAAAGGAAAGATGCACCAGAATTTGTATGGACTCTGTAG 1719 0.466 MNYFPEEVLEHVFNFVTSHRDRNAVSLGCKTWYRVERCSRQKVFIGNCYSISPERVIQMFPRLKSLTLKGKPHFADFNLVPHDWGGFVYPWIEALAKNRMGLEELRMKRMVVSDESLELLSRSFLNFKSLVLDSCEGFTTDGLAAVAANCKFLRELDLQENEIEDLKGQWLSCFPDTCTSLVSLNFACLKGEINLGALERLVARSPNLKSLRLNPAVPLDTLQRILMRAPQLVDLGTGSFVHDPDSETYAKLKSTILKCKSITSLSGFLEVSPRCLRAIYPICSNLTSLNLSYAAGIEGKDMRKLIHHCGKLQRLWILDCIGDRGLDVVAATCKDLQELRVFPCVPFRPGSGAVTEKGLVAISLGCPKLHSLLYFCQQMTNAALITVAKNCPNFIRFRLCILEPTKPDPDTLQPLDEGFGAIVQSCRRIKRLSLSGLLTDKVFLYIGMYGEQLEMLSIAFAGESDKGMLYVLNGCKKLRKLEIRDCPFGNTALLTDVGKYESMRSLWMSSCEVTLGACKSLAKKRPRLNVEIINENEQEDCSLEDGQRVEKMYLYRTLVGKRKDAPEFVWTL 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0657 572 Pfam F-box 2 41 IPR041567 -
Lele07g0657 572 Pfam Transport inhibitor response 1 protein domain 61 107 IPR041101 -
Lele07g0657 572 Gene3D Ribonuclease Inhibitor 41 572 IPR032675 -
Lele07g0657 572 Gene3D - 1 40 - -
Lele07g0657 572 SUPERFAMILY RNI-like 17 531 - -
Lele07g0657 572 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 81 531 - -
Lele07g0657 572 SMART LRR_CC_2 366 390 IPR006553 -
Lele07g0657 572 SMART LRR_CC_2 475 500 IPR006553 -
Lele07g0657 572 SMART LRR_CC_2 124 149 IPR006553 -
Lele07g0657 572 SMART LRR_CC_2 283 308 IPR006553 -
Lele07g0657 572 SMART LRR_CC_2 309 332 IPR006553 -
Lele07g0657 572 FunFam Transport inhibitor response 1 41 572 - -
Lele07g0657 572 FunFam Transport inhibitor response 1 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0657 Lele-ChrLele07 3754885 3757270 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g0657 07 3754885 3757270 Lele07g0657 07 3754885 3757270 ECH
Lele05g0626 05 3697507 3699910 Lele07g0657 07 3754885 3757270 hybridization
Lele06g0441 06 2705162 2707548 Lele07g0657 07 3754885 3757270 hybridization