Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0637 ATGAAAAAATATATATGTTTTTACAGTTTGATGCGTTTTCCAGAGAGCGAGGCTTGGGGTTTAGGTTCTCTCTCTGATGCCAATAAAATTTTCCTTCTTCAAACGTCTCTCATAACCCATCAGCTCCAGTTTCCGTTTCTCGCTACTGCTCTTATTCAAGGAGAAAGAATAAAAGAGTATCCCATCGATCGGACTGCTTGGTCGCTGGGGTATGCAGATTCTGAGGGAATAGTTTTGGTCCAAAGCTGGTGGTACCGTCTTGTATACGAATTATTGAACTGGTTGAAAAAAAATCAGATGCCGGACGAAGACTTGGCGGAGCTTAAGTTCCGTATCTATGATGGGTCAGATATTGGGCCCTTCCGTTACTCGCCAGCTTCTACTGTAGCTATGCTAAAGGAAAGAATTGTTGCAGAATGGCCAAAAGATAAGAAGATTATACCGAAGGAAGCTAATGACATAAAACTCATAAACGCTGGAAAAATTTTGGAAAACGACAAGACAGTTGGTCAATGTAAAGCCCCTTTTGGCGAGCTTCCTAGAGGGGTTATCACCATGCATGTTGTCGTCCAGCCATCTTTGGCAAAAGCCAAAGCAGAGAAAGATGTTGATGAGGTCCCTAGAAAACACATATGTGGATGTTCAATATTGTGA 654 0.4205 MKKYICFYSLMRFPESEAWGLGSLSDANKIFLLQTSLITHQLQFPFLATALIQGERIKEYPIDRTAWSLGYADSEGIVLVQSWWYRLVYELLNWLKKNQMPDEDLAELKFRIYDGSDIGPFRYSPASTVAMLKERIVAEWPKDKKIIPKEANDIKLINAGKILENDKTVGQCKAPFGELPRGVITMHVVVQPSLAKAKAEKDVDEVPRKHICGCSIL 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0637 217 CDD Ubl_MUBs_plant 105 192 - -
Lele07g0637 217 Gene3D - 93 199 - -
Lele07g0637 217 Pfam Ubiquitin-2 like Rad60 SUMO-like 106 215 IPR039540 -
Lele07g0637 217 SUPERFAMILY Ubiquitin-like 100 194 IPR029071 -
Lele07g0637 217 ProSiteProfiles Ubiquitin domain profile. 106 172 IPR000626 GO:0005515
Lele07g0637 217 PANTHER UBIQUITIN-LIKE PROTEIN 3 HCG-1 PROTEIN 100 216 IPR040015 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0637 Lele-ChrLele07 3631007 3635394 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g0637 07 3631007 3635394 Lele07g0637 07 3631007 3635394 ECH
Lele07g0637 07 3631007 3635394 Lele08g0436 08 2664451 2667359 ECH
Lele05g0608 05 3571729 3575957 Lele07g0637 07 3631007 3635394 hybridization
Lele06g0425 06 2609953 2610780 Lele07g0637 07 3631007 3635394 hybridization