Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0425 ATGACCAGGTCTTTGCGATTGTTTGAATTTTACTTCTTTGCCTATAAGAAGATTATACCAAAGGCAGCTAGTGACGTAAAACTCATAGACGCTGGAAAAATTTTGGAAAACAACAAGACAGTTGGTCAATGTAATGCCCCTTTTGGCGAGCTTCCTCGAGGGGTTATCACCATGCATGTTGTCGTCCAGCCATCTGTGGCAAAAGCAAAAGCAGAGAAAGGTGTTGATGAGGTCCCTCGAAAACACATATGCGGATGTTCAATATTGTGA 270 0.4222 MTRSLRLFEFYFFAYKKIIPKAASDVKLIDAGKILENNKTVGQCNAPFGELPRGVITMHVVVQPSVAKAKAEKGVDEVPRKHICGCSIL 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0425 89 Pfam Ubiquitin-2 like Rad60 SUMO-like 17 87 IPR039540 -
Lele06g0425 89 PANTHER UBIQUITIN-LIKE PROTEIN 3 HCG-1 PROTEIN 16 88 IPR040015 -
Lele06g0425 89 SUPERFAMILY Ubiquitin-like 19 66 IPR029071 -
Lele06g0425 89 Gene3D - 8 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0425 Lele-ChrLele06 2609953 2610780 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0425 06 2609953 2610780 Lele06g0425 06 2609953 2610780 ECH
Lele05g0608 05 3571729 3575957 Lele06g0425 06 2609953 2610780 ECH
Lele06g0425 06 2609953 2610780 Lele07g0637 07 3631007 3635394 hybridization
Lele06g0425 06 2609953 2610780 Lele08g0436 08 2664451 2667359 hybridization