Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0598 ATGGGAGTGACGCCAAATATTGCACCCTCCATGCTATCATCGGACTTCGCTAATTTAGCTTCCGAGGCTGCTCGCATGCTCAACGATGGCGCCGATTGGCTCCACATGGATATTATGGGCCCTATAATAATTATCAGGCACTTTGTCCCCAATCTAACCATTGGTGCTCCAGTCATTGAAAGCTTAAGAAAGCACACAAAGGCATATCTGGACTGCCACCTGATGGTCACAAATCCTCTTGACTATGTTGAACCTTTGAGAAAGGCTGGTGCTTCTGGTTTTACATTTCATATAGAGACATCTAAAGGTTGCTACTCCTTATGCTTTATTTTCATGGCATGCCGTTTACCACTGGCCACATTTGTTATGTTGTTTTCTTCTCTGCATGCTCAAACGCTGTTATTGTGGACAGATAATTGGCCAGAACTTGTCCAGAGAATTAAATCAGGGGGCATGATGCCTGGTGTAGCATTAAAGCCTGGGACACCAGTTGAAGAGATTTATCCTCTGGTTGAAGCAGAAAATCCAGTGGAATTGGTCCTTGTGATGACTGTGGAACCCGGATTTGGAGGACAGAAATTTATGCCTGAGACGATGGATAAGGTACGGCTGCTAAGGCAGAAGTATCCATCACTTAACATTGAGGTTGATGGTGGACTAGGGCCTTCGACCATTGATACGGCTGCATCTGCAGGAGCAAACTGCATTGTTGCGGGAAGCTCGGTATTCGGAGCCCCTGAGCCAGCTCAAGTAATATCCTTGATGAGGAAGAGCGTTGAGAATGCCCAGCAAACAAACTGA 801 0.4607 MGVTPNIAPSMLSSDFANLASEAARMLNDGADWLHMDIMGPIIIIRHFVPNLTIGAPVIESLRKHTKAYLDCHLMVTNPLDYVEPLRKAGASGFTFHIETSKGCYSLCFIFMACRLPLATFVMLFSSLHAQTLLLWTDNWPELVQRIKSGGMMPGVALKPGTPVEEIYPLVEAENPVELVLVMTVEPGFGGQKFMPETMDKVRLLRQKYPSLNIEVDGGLGPSTIDTAASAGANCIVAGSSVFGAPEPAQVISLMRKSVENAQQTN 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0598 266 CDD RPE 7 256 IPR000056 GO:0005975|GO:0016857
Lele07g0598 266 Pfam Ribulose-phosphate 3 epimerase family 137 243 IPR000056 GO:0005975|GO:0016857
Lele07g0598 266 Pfam Ribulose-phosphate 3 epimerase family 7 102 IPR000056 GO:0005975|GO:0016857
Lele07g0598 266 SUPERFAMILY Ribulose-phoshate binding barrel 7 261 IPR011060 -
Lele07g0598 266 PANTHER RIBULOSE-5-PHOSPHATE-3-EPIMERASE 137 264 IPR000056 GO:0005975|GO:0016857
Lele07g0598 266 ProSitePatterns Ribulose-phosphate 3-epimerase family signature 2. 180 202 IPR000056 GO:0005975|GO:0016857
Lele07g0598 266 PIRSF RPE 116 266 IPR026019 GO:0004750|GO:0006098
Lele07g0598 266 PIRSF RPE 1 109 IPR026019 GO:0004750|GO:0006098
Lele07g0598 266 Gene3D Aldolase class I 2 266 IPR013785 -
Lele07g0598 266 Coils Coil 252 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0598 Lele-ChrLele07 3409565 3412410 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g0598 07 3409565 3412410 Lele07g0598 07 3409565 3412410 ECH
Lele05g0571 05 3349028 3353982 Lele07g0598 07 3409565 3412410 hybridization
Lele06g0393 06 2403918 2406709 Lele07g0598 07 3409565 3412410 hybridization