Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0427 ATGTCGGCAGGACATGAACGTGCACTGCTTCCGTGTGCCTTCATTGTTCTTGCATATCTGGTGGGTTTAAGTGGAATCCATCATTTCATTGTGTCCTCTGCTCTCTTGGTGGACTGGAGACTGGAGTTGTTTTGTGAACTCCTGGGAAACTTGCTGCAATATTTCTTGATAAGGAATTACCGCAACATGCGTGCTAATATTGCTGCACCACAACCACTAGGAATTGGAAGAGGGGAAGGAAAGAAAGCAGCTGATTGTCTGCGCACAGCTCTCAAGGAATACAGCCTAAAATTTGGTACCATTCTCAATGATCCGGACTTGGCCTCTTTCAGAGCTTTGCCTGAATTCAAACAACTACAGGAAGAGGTTTTTCCCACTGAATGCTTAGGGGCCAGGCTAGGCGGTGAAGATATTGGCTACAGTTTTCGGAGAGACTTAAAACTTATTAGTGAAGTTCAAGAACCATTCCGTGGAATTAGGAGATTCTTCTATATAGCATTTACTGCAGCTGCAGGGATTTCTACGTTCTTTACTCTGCCCAGGCTGTTTCGTGCTATTAATGGGGGGGATGATGCTCCTGATCTTTGGGAAACTGCTGGGAATGCCGCCATCAACATTGGAGAAGAGGAACAACTTGCACAGATATCACGAAATGAGACACTATCAAGGTTGCCTTTGCGCCTTTCAACTAATCGCATAGTAGAACTCGTGCAGCTACGGGACACAGTTAGACCAGTTATATTAGCAGGGAAAAAGGAAACAGTATCTCTGGCTTTGCAAAGAGCCGAGAGATTTCGCACTGAGCTCCTTAGATGCGGTGTTCTGTTGGTTCCTATAATCTGGGGAGAAGGTAGGGAAGCAAAAATTGAGAAGAAAGGTTTTGGTCTTGCAGCAAAGGCTTCCGCATCTCTTCCATCCATTGGGGAAGATTTTGATGAGCGAACACAATCCATAGTTGCAAAATCGAAGTTGAAAGCTGAAATTAGGTTCAAGGCTGAGGTTATATCGCCAGCTGAATGGGAAAGGTGGATAAGGGATCAGCAGAAGGCTGAAGGAGTTACTCCTGGTGAAGATGTCTACATTATACTGCGGTTGGATGGTCGTGTTCGAAGATCGGGGAAGAAGCAGCAACAAGCAGAAGCAATGGCAAGCTCTTCGTCTCTGCTCGCCTTGTTGTTCGTGGTGGCCTCCATTGTCACATATCCAGTCACGGCAGACGCAATTGGCGAGCACCGGCTTCCGTGGGTGCCAATGAGAGGCGGGTGCGAAGGCTCGATAGAGGAGTGCATGGGAGAGGGAGGGACGGTGGTGACGGAGATGGAGATGAGCCGGCGCATCTTAGCAACATCTCAGTATATAAGCTATAAGGCGCTGCAGAGGAACACGGTGCCGTGCTCCCTGAGAGGCGCGTCCTACTACAACTGCCAACCAGGTGCGGAAGCTAACCCTTATACCCGAGGCTGCGCCACAATCACTCGCTGCCGCACTAATTAG 1494 0.4839 MSAGHERALLPCAFIVLAYLVGLSGIHHFIVSSALLVDWRLELFCELLGNLLQYFLIRNYRNMRANIAAPQPLGIGRGEGKKAADCLRTALKEYSLKFGTILNDPDLASFRALPEFKQLQEEVFPTECLGARLGGEDIGYSFRRDLKLISEVQEPFRGIRRFFYIAFTAAAGISTFFTLPRLFRAINGGDDAPDLWETAGNAAINIGEEEQLAQISRNETLSRLPLRLSTNRIVELVQLRDTVRPVILAGKKETVSLALQRAERFRTELLRCGVLLVPIIWGEGREAKIEKKGFGLAAKASASLPSIGEDFDERTQSIVAKSKLKAEIRFKAEVISPAEWERWIRDQQKAEGVTPGEDVYIILRLDGRVRRSGKKQQQAEAMASSSSLLALLFVVASIVTYPVTADAIGEHRLPWVPMRGGCEGSIEECMGEGGTVVTEMEMSRRILATSQYISYKALQRNTVPCSLRGASYYNCQPGAEANPYTRGCATITRCRTN 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0427 497 Pfam Rapid ALkalinization Factor (RALF) 436 495 IPR008801 -
Lele07g0427 497 PANTHER PROTEIN LOW PSII ACCUMULATION 1, CHLOROPLASTIC 77 374 - -
Lele07g0427 497 Pfam Low psii accumulation1 / Rep27 143 207 IPR021883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0427 Lele-ChrLele07 2406824 2415854 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g0427 07 2406824 2415854 Lele07g0427 07 2406824 2415854 ECH
Lele05g0410 05 2330034 2333392 Lele07g0427 07 2406824 2415854 hybridization
Lele06g0225 06 1370853 1374177 Lele07g0427 07 2406824 2415854 hybridization