Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0413 ATGGCCTCCGAACTGATTTTCAGAGGCCACGAGTCCCAACCCGTCCATGATTCCTATTCCCCCAAGCCCCTCAAGCCTTGGCTCTCCGTCACTCGCCCTATTCGCTACCTCCTCCGCGAGCAGCGCCTCCTCTTCGTCCTCCTCGGCATTGCCATAGCTTCCCTGTTCTTCATCTTCGTCCCTTCCTCTCGCAACCCTTCTCGCCCTGACTCTCTCGCCGTTCCTCACTTCGAGTACGACTCTGCTCCCTTGTTCCATGAGCCCAGGATCGATCGCTCTCTCCCCCATAAGATGCCTGTTCATTCCTTTGGGAAGGTTCCCTTGGGGATTAAGAGAAAGGGGCTCCGAATCGTGGTTACTGGCGGGGCGGGTTTCGTCGGGTCTCACCTCGTGGATCGTCTGATTGCCCGAGGCGACAGCGTGATCGTTGTTGATAATTTCTTCACCGGCAGGAAGGAGAACGTGATGCACCACTTCGGGAACCCCAGATTTGAGCTCATCCGACACGACGTCGTCGAGCCGCTCTTGCTGGAGGTGGATCAGATCTATCATCTTGCATGCCCTGCATCCCCCGTCCATTACAAGTTCAACCCCGTCAAGACTATCATATCCTTTTTCTTTGACCCGGTCCAATTGTTCAATTTCTTTGTCAAAACTCAAAAATATGTTGTCTGTGTTCTGTTTTCATTCACCAATGTGGTGGGAACCTTGAACATGCTGGGGCTGGCCAAAAGAGTTGGCGCAAGGTTTTTGCTAACCAGTACCAGTGAGGTTTACGGTGATCCTCTTCAACACCCTCAGAAGGAGACTTACTGGGGCAACGTCAATCCTATTGGCGTCCGAAGTTGTTACGACGAGGGAAAGCGTACGGCCGAGACGTTGACAATGGATTACCACAGAGGAGCAGGCGTTGAGGTTAGAATTGCCAGAATCTTTAACACCTATGGTCCCCGAATGTGCCTAGACGATGGTCGCGTTGTCAGTAACTTCGTTGCTCAGGCATTAAGAAAGGAGCCTTTGACTGTTTATGGGGATGGGAAGCAGACAAGGAGTTTTCAGTATGTTTCTGATTTGGTCGAGGGTCTGATGCGGCTTATGGAGGGAGAGCATGTGGGACCTTTCAACCTCGGAAATCCTGGTGAATTCACCATGCTCGAACTTGCCAAGGTGGTGCAAGAAACAATAGACCCAGATGCGAAAATAGAGTACAGGCCCAACACAGAGGATGACCCACACAAGAGGAAGCCTGATATTTCAAGGGCCAAGGAGCTATTAGGGTGGAAGCCCAAGGTGGACCTGCGTAAGGGACTGCCTTTAATGGTTTCTGACTTCCGACAACGTATTTTTGGTGACCACAAGGAAGGTGCCACCTCCACCTAA 1380 0.5181 MASELIFRGHESQPVHDSYSPKPLKPWLSVTRPIRYLLREQRLLFVLLGIAIASLFFIFVPSSRNPSRPDSLAVPHFEYDSAPLFHEPRIDRSLPHKMPVHSFGKVPLGIKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPRFELIRHDVVEPLLLEVDQIYHLACPASPVHYKFNPVKTIISFFFDPVQLFNFFVKTQKYVVCVLFSFTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAKVVQETIDPDAKIEYRPNTEDDPHKRKPDISRAKELLGWKPKVDLRKGLPLMVSDFRQRIFGDHKEGATST 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0413 459 Pfam GDP-mannose 4,6 dehydratase 119 201 IPR016040 -
Lele07g0413 459 Pfam GDP-mannose 4,6 dehydratase 228 438 IPR016040 -
Lele07g0413 459 Gene3D - 264 449 - -
Lele07g0413 459 Gene3D - 111 263 - -
Lele07g0413 459 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 24 452 IPR044516 GO:0042732|GO:0048040|GO:0070403
Lele07g0413 459 FunFam UDP-glucuronic acid decarboxylase 2 111 263 - -
Lele07g0413 459 CDD UGD_SDR_e 116 445 - -
Lele07g0413 459 MobiDBLite consensus disorder prediction 1 20 - -
Lele07g0413 459 FunFam UDP-glucuronic acid decarboxylase 1 264 449 - -
Lele07g0413 459 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 113 449 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0413 Lele-ChrLele07 2324150 2327152 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0413 20 437 Miscellaneous Gene Families AT4G00110 23.400 7.26e-18 83.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g0413 07 2324150 2327152 Lele07g0413 07 2324150 2327152 ECH
Lele05g0395 05 2243834 2246212 Lele07g0413 07 2324150 2327152 hybridization
Lele06g0212 06 1290881 1294127 Lele07g0413 07 2324150 2327152 hybridization