Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0395 ATGTTGTCTGTGTTCTGTTTTCGTATTCATTATTTTGTGTGTTCTGGAGTCCTTAACTGTGTTCTTGTTCACAAGACCAATGTGGTGGGAACCTTGAACATGCTGGGTCTGGCCAAAAGAGTTGGCGCAAGGTTTTTGCTAACCAGTACCAGTGAGGTTTACGGTGATCCTCTTCAACACCCTCAGAAGGAGACTTACTGGGGCAACGTCAATCCTATTGGTGAGTATTCTCTCTATCTCTCTCTCACACACAATTTTCTTAAGGTTTCCGGTGAACCAGCCGGAATTTCACCACATGCTGGTCATTCGGTCAGTGTCCGAAGTTGTTACGACGAGGGAAAGCGTACGGCGGAGACGTTGGCAATGGATTACCACAGAGGAGCAGGCGTTGAGGTTAGAATTGCTAGAATCTTTAACACCTATGGTCCCCGAATGTGCCTAGACGACGGTCGCGTTGTCAGTAACTTTGTTGCTCAGGCATTAAGAAAGGAGCCTTTGACTGTTTATGGGGATGGGAAGCAGACAAGGAGTTTTCAGTATGTTTCTGATTTGGTCGAGGGTCTGATGCGGCTTATGGAGGGAGAGCATGTGGGACCTTTCAACCTCGGAAATCCTGGTGAATTCACCATGCTCGAACTTGCCAAGGTGGTGCAAGAAACAATAGACCCAGATGCGAAAATAGAGTACAAGCCCAACACAGAGGATGACCCACACAAGAGGAAGCCTGATATTTCAAGGGCCAAGGAGCTATTAGGGTGGAAGCCGAAGGTGGACCTGCGCAAGGGACTGCCTTTAATGGTTTCTGACTTCCGACAACGTATTTTTGGTGACCACAAGGAAGAAAAGGGCAGCATGGTCGGTAGTTTGCAGGCAGAGTTAGGGGGTCTTTCCCCATTATCCTAA 903 0.4795 MLSVFCFRIHYFVCSGVLNCVLVHKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGEYSLYLSLTHNFLKVSGEPAGISPHAGHSVSVRSCYDEGKRTAETLAMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAKVVQETIDPDAKIEYKPNTEDDPHKRKPDISRAKELLGWKPKVDLRKGLPLMVSDFRQRIFGDHKEEKGSMVGSLQAELGGLSPLS 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0395 300 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 18 276 IPR036291 -
Lele05g0395 300 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 19 280 IPR044516 GO:0042732|GO:0048040|GO:0070403
Lele05g0395 300 Gene3D - 97 275 - -
Lele05g0395 300 MobiDBLite consensus disorder prediction 281 300 - -
Lele05g0395 300 Pfam GDP-mannose 4,6 dehydratase 104 264 IPR016040 -
Lele05g0395 300 Pfam GDP-mannose 4,6 dehydratase 21 65 IPR016040 -
Lele05g0395 300 FunFam UDP-glucuronic acid decarboxylase 1 99 275 - -
Lele05g0395 300 Gene3D - 22 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0395 Lele-ChrLele05 2243834 2246212 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0395 108 267 Miscellaneous Gene Families AT1G02000 25.698 2.12e-08 53.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0395 05 2243834 2246212 Lele05g0395 05 2243834 2246212 ECH
Lele05g0395 05 2243834 2246212 Lele07g0413 07 2324150 2327152 hybridization
Lele05g0395 05 2243834 2246212 Lele08g0220 08 1317887 1320977 hybridization