Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0212 ATGGCCTCCGAACTCATTTTCAGAGGCCACGAGTCCCAACCCGTCCACGATTCCTACTCTCCCAAGCCCCTCAAGCCTTGGCTCTCCGTCACTCGCCCTATTCGCTACCTCCTCCGCGAGCAGCGCCTCTTCTTCGTCCTCCTCGGCATTGCTATCGCCTCCCTGTTCTTCACCTTCGTCCCTACCTCTCGCTCCCCTCCCCGCTCTGACTCTCTCTCTGTTCCTTACTTCGAGCACGACTCTCTCTCTGCTCCTCTGTTCCATGAGGCCAGGATCGACCGCTCTCTCCCCCACAAGATGCCTGTTCATTCATTCGGCAAGGTCCCCTTGGGGATTAAGAGAAAGGGGCTCCGTATCGTGGTTACGGGCGGGGCGGGTTTCGTCGGGTCTCACCTCGTGGATCGTCTGATTGCTAGAGGCGACAGCGTCATCGTTGTTGATAATTTCTTCACCGGCAGGAAGGAGAACGTGATGCACCACTTCGGGAACCCCAGATTTGAGCTCATCCGACACGATGTCGTCGAGCCGCTCTTGCTAGAGGTGGATCAGATCTATCATCTTGCATGCCCTGCATCTCCCGTTCATTACAAGTTCAACCCCGTCAAAACTATCATATCCTTTTTATTAGACCCGGTCCAATTATTCAATTTCTTGGTAAAAAATAGTTGTGTTTCAATTCGTATTCATTGTTTTGTGTGTTCTGGAGTCCTTAATTGTCTTATTGTTCACAAGACCAATGTGGTGGGAACCTTGAACATGCTGGGGCTGGCCAAAAGAGTTGGCGCAAGATTTCTGCTAACCAGTACAAGTGAGGTTTACGGTGATCCTCTTCAACACCCTCAGAAGGAGACTTACTGGGGCAATGTCAATCCTATTGGTGTCCGAAGTTGTTACGACGAGGGAAAGCGTACGGCCGAGACGTTGGCAATGGATTACCACAGAGGAGCAGGCGTTGAGGTTAGAATTGCTAGAATCTTTAACACCTATGGTCCCCGAATGTGTCTAGACGATGGTCGCGTTGTCAGTAACTTCGTTGCTCAGGCATTAAGAAAGGAGCCTTTGACTGTTTATGGGGATGGGAAGCAGACGAGGAGTTTTCAGTATGTTTCTGATTTGGTTGAGGGTCTGATGCGCCTTATGGAGGGAGAGCACGTGGGTCCTTTCAACCTCGGAAATCCTGGTGAATTCACCATGCTCGAACTTGCCAAGGTGGTGCAAGAAACAATAGACCCAGATGCGAAGATAGAGTACAAGCCCAACACAGAGGATGACCCACACAAGAGGAAGCCTGATATTTCAAGGGCCAAGGAGCTGTTGGGGTGGGAGCCCAAGGTGAACCTGCACAAGGGACTGCCTTTAATGGTTTCTGACTTCCGGCAGCGCATTTTTGGTGACCACAAGGAAGGGGGACTTTCCCCATTATCCTCAACCTCAAGATCCATCACTTCATGGATTTTACCTTTTCAAGATTGGTAG 1476 0.5075 MASELIFRGHESQPVHDSYSPKPLKPWLSVTRPIRYLLREQRLFFVLLGIAIASLFFTFVPTSRSPPRSDSLSVPYFEHDSLSAPLFHEARIDRSLPHKMPVHSFGKVPLGIKRKGLRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPRFELIRHDVVEPLLLEVDQIYHLACPASPVHYKFNPVKTIISFLLDPVQLFNFLVKNSCVSIRIHCFVCSGVLNCLIVHKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQKETYWGNVNPIGVRSCYDEGKRTAETLAMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQYVSDLVEGLMRLMEGEHVGPFNLGNPGEFTMLELAKVVQETIDPDAKIEYKPNTEDDPHKRKPDISRAKELLGWEPKVNLHKGLPLMVSDFRQRIFGDHKEGGLSPLSSTSRSITSWILPFQDW 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0212 491 FunFam UDP-glucuronic acid decarboxylase 1 278 463 - -
Lele06g0212 491 Gene3D - 113 277 - -
Lele06g0212 491 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 25 466 IPR044516 GO:0042732|GO:0048040|GO:0070403
Lele06g0212 491 Gene3D - 278 463 - -
Lele06g0212 491 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 118 460 IPR036291 -
Lele06g0212 491 Pfam GDP-mannose 4,6 dehydratase 241 452 IPR016040 -
Lele06g0212 491 Pfam GDP-mannose 4,6 dehydratase 121 204 IPR016040 -
Lele06g0212 491 MobiDBLite consensus disorder prediction 1 20 - -
Lele06g0212 491 CDD UGD_SDR_e 118 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0212 Lele-ChrLele06 1290881 1294127 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0212 20 451 Miscellaneous Gene Families AT4G00110 22.976 9.10e-16 77.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0212 06 1290881 1294127 Lele06g0212 06 1290881 1294127 ECH
Lele06g0212 06 1290881 1294127 Lele07g0413 07 2324150 2327152 hybridization
Lele06g0212 06 1290881 1294127 Lele08g0220 08 1317887 1320977 hybridization