Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0348 ATGGCAAATAGACCTGATCCAGATATTGACGACGATTTTAGTGAACTTTACAAGGAGTACACCGGCCCTTCTGGAACTGCTACTACTAATACCCAAGAGAAGACAAAGTCAAACAAGAGGTCTCATGCAGGGTCAGATGAGGAGGAGGAGCCTCGTGACCCCAATGCTGTCCCAACTGATTTCACTAGCCGAGAAGCTAAGGTTTGGGAGGCTAAGTCAAAGGCTACAGAGAGGAACTGGAAGAAAAGAAAAGAAGAAGAAATGATCTGCAAACTTTGTGGTGAATCCGGGCATTTCACTCAGGGTTGTCCATCTACATTAGGAGCCAATCGCAAGTCTCAGGATTTCGTTGAAAGAGTACCAGCAAGAGACAAACATATGAGAGCACTTTTCACAGAGAAAGTTATAAGCAAGATTGAAAGGGATATTGGCTGCAAGATAAAGATGGATGAGAAATTTATTATCGTCAGTGGTAAGGATAGATTAATTTTGGCAAAAGGTGTTGATGCTGTGCATAAGATTAGAGAGGAGGGCAATCAAAGGGGACCTTCTAGTTCTCACGTGACCAGATCTAGGTCACCTGAGAGAAGTCCCGCTGGTGGACGGTTTCAACGATCTGAGCCCCCAAGGTCTCATTCTGGACCTCGTAATACTTCTCATTTTCAACAAAGGTTTGGTAGGCAAGAGAGGGTTGTTGAAGACCGTGTGAGAGAGGACTTTCAAAAATTTCCAAGAGGTTCTCCACAAGCTTTTGGAAATAGTGGAGCTAGAGGTCGTCCAAGGCATTCAAGATCTCCTAGAGAAGCACCTTATACAGGCAACCCATATAATTCATATGATGACCGTAATCTAAACATGGGAACATATAGAAATGATGGATGGGATTCGCAAGCTAGAGAATCTGAAATCTCTGGTCGTCAGTTTGATTGCAATGCCTTCCCTCAGACATTAGAAGAATTAGAGATGGAGTATAAGAGGGAGACCACAGAGCTTGGGAAAATCCGTGATAGAGAAGAAGATGAAGAAAATTTTAGGCATCGTGAGGCTGTTAGAGATATGAGGGAGAACTACATGAACAAAGTAGCTATGCTGAGGGCCACACATGCCAAACAGTGGGAAGAATTTCTTCAGCTTGATGCTCAGAGGCGTCAACAGCAGGCTGTCCAACAAATGCCTACTTCTGTCCTCATTATACTGGGGCCAGCTTACCCTTGGAATTGA 1221 0.4406 MANRPDPDIDDDFSELYKEYTGPSGTATTNTQEKTKSNKRSHAGSDEEEEPRDPNAVPTDFTSREAKVWEAKSKATERNWKKRKEEEMICKLCGESGHFTQGCPSTLGANRKSQDFVERVPARDKHMRALFTEKVISKIERDIGCKIKMDEKFIIVSGKDRLILAKGVDAVHKIREEGNQRGPSSSHVTRSRSPERSPAGGRFQRSEPPRSHSGPRNTSHFQQRFGRQERVVEDRVREDFQKFPRGSPQAFGNSGARGRPRHSRSPREAPYTGNPYNSYDDRNLNMGTYRNDGWDSQARESEISGRQFDCNAFPQTLEELEMEYKRETTELGKIRDREEDEENFRHREAVRDMRENYMNKVAMLRATHAKQWEEFLQLDAQRRQQQAVQQMPTSVLIILGPAYPWN 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0348 406 MobiDBLite consensus disorder prediction 1 78 - -
Lele07g0348 406 MobiDBLite consensus disorder prediction 1 17 - -
Lele07g0348 406 MobiDBLite consensus disorder prediction 226 242 - -
Lele07g0348 406 MobiDBLite consensus disorder prediction 174 282 - -
Lele07g0348 406 MobiDBLite consensus disorder prediction 210 225 - -
Lele07g0348 406 PANTHER OS01G0252900 PROTEIN 1 391 - -
Lele07g0348 406 MobiDBLite consensus disorder prediction 35 55 - -
Lele07g0348 406 ProSiteProfiles Zinc finger CCHC-type profile. 90 105 IPR001878 GO:0003676|GO:0008270
Lele07g0348 406 Coils Coil 317 337 - -
Lele07g0348 406 SUPERFAMILY Retrovirus zinc finger-like domains 77 109 IPR036875 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0348 Lele-ChrLele07 1932305 1934889 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g0348 07 1932305 1934889 Lele07g0348 07 1932305 1934889 ECH
Lele05g0329 05 1877555 1882444 Lele07g0348 07 1932305 1934889 hybridization
Lele06g0147 06 906856 910313 Lele07g0348 07 1932305 1934889 hybridization