Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0147 ATGCCCAAGGTTGCTCTTGTCTATCTTCATCGGCGTTTTGCCGTGAGGGAAGTTCGTCGTCGTCTCCAGAATCGGATTCAATTTAAAGGGGGCCACTTAATGGCAAATAGACCTGATCCAGATATTGACGACGATTTTAGTGACCTTTACAAGGAGTACACCGGCCCTCCTGGAACTGTTACTACTAATACCCAAGAGAAGACAAAATCAAACAAGAGGTCTCATGCAGGATCAGATGAGGAGGAGGAGCCTCGTGACCCCAATGCTGTCCCAACTGATTTCACTAGCCGAGAAGCTAAAGTTTGGGAGGCTAAGTCAAAGGCTACAGAGAGGAACTGGAAGAAAAGAAAAGAAGAAGAAATGATCTGCAAACTTTGTGGTGAATCAGGGCATTTCACTCAGGGTTGTCCATCTACACTAGGAGCCAATCGCAAGTCTCAGGATTTCTTTGAAAGAGTACCAGCAAGAGACAAACATATGAGAGCACTTTTCGCAGAGAAAGTTATGAGCAAGATTGAAAGGGATATTGGCTGCAAGATAAAGATGGATGAGAAATTTATTATCGTCAGTGGTAAGGATAGATTAATTTTGGCAAAAGGTGTTGATGCTGTGCACAAGATTAGAGAGGAGGGCAATCAAAGGGGGTCTTCTAGTTCTCACGTGACCAGATCTAGGTCACCTGAGCGAAGTCCTGCTGGTGGACGGTTTCAACACTCTGAGCCCCCAAGGTCTCATTCTGGACCTGGCAATACTTCGCATTTTCAACAAAGGTTTGGTAGGCAAGAGAGGGTTGTTGAAGACCGTATGAGAGAGGACTTTCAAAAATTTCCAAGAGGTTCTCCACAAGGTAGGGACAGCATAGGGTTTGTTTACGACATCCTTAGAAAACTGATTATAAAGATAGGTTTTGTATTTAAAACTACATCTGTGTTGGCATATCAAGTGCTAATTTCTTTTGGAAATAGTGGAGCTAGAGGTCGTCCAAGTCATTCAAGATCTCCTAGAGAAGCACCTTATGCAGGCAACCCATATAATTCATATGATGACCGTAATCTAAACATGGGCAAATATAGAAATGATGGATGGGATTCGCAAGCTAGAGAATCTGATATCCAATCTGGTCGACGGTTTGATTGCAATGCCTTCCCTCAGACATTAGAAGAATTAGAGATTGAGTGTAAGAGGGAGGCCACAGAGCTTGGGAAAATCCGTGATAGAGAAGAAGATGAAGAAAATTTTAGGCATCGCGAGGCTGTTAGAGATATGAGGGAGAACTACATGAACAAAGTAGCTATGCTGAGGGCCAGACATTACAAACAGTGGGAAGAATTTCTTCAGCTTGATGCTCAGAGGCGTCAACAGCAGGCTGTTCAACAAATGCCTACTTCTGGTTTTGGGGGTTATAAACAGCAAAACTTTTCTGAATATGATGAATCCACTGGCAATCTTCATTATACTGGGGCCAGCTTACCCTTGGAACTGAGGAACAGGTTCTCAAACACTATGGAAAACTATCCTACTAGGCGTCATGAGAATTTTGGGGAATTTCAGAGGCGTGGAGATTATCCAAAAGCTTACAACAGATATTAA 1590 0.4314 MPKVALVYLHRRFAVREVRRRLQNRIQFKGGHLMANRPDPDIDDDFSDLYKEYTGPPGTVTTNTQEKTKSNKRSHAGSDEEEEPRDPNAVPTDFTSREAKVWEAKSKATERNWKKRKEEEMICKLCGESGHFTQGCPSTLGANRKSQDFFERVPARDKHMRALFAEKVMSKIERDIGCKIKMDEKFIIVSGKDRLILAKGVDAVHKIREEGNQRGSSSSHVTRSRSPERSPAGGRFQHSEPPRSHSGPGNTSHFQQRFGRQERVVEDRMREDFQKFPRGSPQGRDSIGFVYDILRKLIIKIGFVFKTTSVLAYQVLISFGNSGARGRPSHSRSPREAPYAGNPYNSYDDRNLNMGKYRNDGWDSQARESDIQSGRRFDCNAFPQTLEELEIECKREATELGKIRDREEDEENFRHREAVRDMRENYMNKVAMLRARHYKQWEEFLQLDAQRRQQQAVQQMPTSGFGGYKQQNFSEYDESTGNLHYTGASLPLELRNRFSNTMENYPTRRHENFGEFQRRGDYPKAYNRY 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0147 529 PANTHER OS01G0252900 PROTEIN 34 529 - -
Lele06g0147 529 MobiDBLite consensus disorder prediction 68 88 - -
Lele06g0147 529 MobiDBLite consensus disorder prediction 243 258 - -
Lele06g0147 529 MobiDBLite consensus disorder prediction 322 348 - -
Lele06g0147 529 Coils Coil 386 406 - -
Lele06g0147 529 MobiDBLite consensus disorder prediction 36 50 - -
Lele06g0147 529 MobiDBLite consensus disorder prediction 208 261 - -
Lele06g0147 529 ProSiteProfiles Zinc finger CCHC-type profile. 123 138 IPR001878 GO:0003676|GO:0008270
Lele06g0147 529 MobiDBLite consensus disorder prediction 32 102 - -
Lele06g0147 529 SUPERFAMILY Retrovirus zinc finger-like domains 110 142 IPR036875 GO:0003676|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0147 Lele-ChrLele06 906856 910313 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0147 06 906856 910313 Lele06g0147 06 906856 910313 ECH
Lele06g0147 06 906856 910313 Lele07g0348 07 1932305 1934889 hybridization
Lele06g0147 06 906856 910313 Lele08g0150 08 917601 919111 hybridization