Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0329 ATGCTCTGGCTGTCAAAATCCAAAGATTCAACCTTTGTCCGCATGAGTGTGACAAATGATAACCGAAAAAGCTCTACCAAGGTTTGTACTAGTGATGCTGCCACTCCTTGGAGCTCTCGTTCCAATCATTTTTTGTGGGGTTCAGTTGATGAAGATAACAACATATTCAGTTTTGAATGTTCGTTTCATATTTCTTATCCGTTAATTTCTTCCCTCTCCCATGGTTTGCGACCTCCCCGTCCTTTCGTTAGGGGAAGGGGATTTGAAATTCGATATGTAGGTGCTGCAATTCGACTTACTATAGGTGTTTTGAAGATCGTATATTTGAATATCCTTGTTTGTGCATCTATTCTACATTATCCCAGCTTAGTTATATCACCTGATCCAGATATTGACGACGATTTTAGTGAACTTTACAAGGAGTACACCGGCCCTTCTGGAACTGCTACTACTAATACCCAAGAGAAGACAAAGTCAAACAAGAGGTCTCATGCAGGGTCGGATGAGGAGGAGGAGCCTCGTGACCCCAATGCTGTCCCAACTGATTTCACTAGCCGAGAAGCTAAGGTTTGGGAGGCTAAGTCAAAGGCTACAGAGAGGAACTGGAAGAAAAGAAAAGAAGAAGAAATGATCTGCAAACTTTGTGGTGAATCCGGGCATTTCACTCAGGGTTGTCCATCTACATTAGGAGCCAATCGCAAGTCTCAGGATTTCTTTGAAAGAGTACCAGCAAGAGACAAGCATATGAGAGCACTTTTCACAGAGAAAGCTATAAGCAAGATTGAAAGGGATATTGGCTGCAAGATAAAGATGGATGAGAAATTTATTATCGTCAGTGGTAAGGATAGATTAATTTTGGCAAAAGGTGTTGATGCTGTGCATAAGATTAGAGAGGAGGGCAATCAAAGGGGGCCTTCTCGTTCTCACGTGACCAGGTCTAGGTCACCTGAGAGAAGTCCCGCTGGAGGACGGTTTCAACGCTCTGAGCCTGCAAGGTCTCATTCTGGACCTCGCAATACTTCTCATTTTCAACAAAGGTTTGGTAGGCAAGAGAGGGTTGTTGAAGACCGTGTGAGAGAGGACTTTCAAAAATTTCCAAGAGGTTCTCCACAAGCTTTTGGAAATAGTGGAGCTAGAGGTCGTCCAAGGCATTCAAGATCTCCTAGAGAAGCACCTTATACAGGCAACCCATATAATTCATATGATGACCGTAATCTAAACATGGGAACATATAGAAATGATGGATGGGATTCGCAAGCTAGAGAATCTGATATCTCTGGTCATCAGTTTGATTGCAATGCCTTCCCTCAGACATTAGAAGAATTAGAGATGGAGTATAAGAGGGAGACCACAGAGCTTGGGAAAATCCGTGATAGAGAAGAAGATGAAGAAACTTTTAGGCATCGTGAGACTGTTAGAGATATGAGGGAGAACTACATGAACAAAGTAGCTATGCTGAGGGCCACACATGCCAAACAGTGGGAAGAATTTCTTCAGCTTGATGCTCAGAGGCGTCAACAGCAGGCTGTCCAACAAATGCCTACTTCTGGTTTTGGGGGTTATAAACAGCAAAACTTTTCTGAATATGATGGATCCACAGCCAGTCCTCATTATACTGGGGCCAGCTTACCCTTAGAATTGAGGAACAGGTTCTCAAACACTCTGGAAAACTATCCTACTAGGCGTCATGAGAATTTTGACGAATTTCAGAGGCGTGGAGATTATCCAAAAGCTTACAACAGATTTTAA 1749 0.43 MLWLSKSKDSTFVRMSVTNDNRKSSTKVCTSDAATPWSSRSNHFLWGSVDEDNNIFSFECSFHISYPLISSLSHGLRPPRPFVRGRGFEIRYVGAAIRLTIGVLKIVYLNILVCASILHYPSLVISPDPDIDDDFSELYKEYTGPSGTATTNTQEKTKSNKRSHAGSDEEEEPRDPNAVPTDFTSREAKVWEAKSKATERNWKKRKEEEMICKLCGESGHFTQGCPSTLGANRKSQDFFERVPARDKHMRALFTEKAISKIERDIGCKIKMDEKFIIVSGKDRLILAKGVDAVHKIREEGNQRGPSRSHVTRSRSPERSPAGGRFQRSEPARSHSGPRNTSHFQQRFGRQERVVEDRVREDFQKFPRGSPQAFGNSGARGRPRHSRSPREAPYTGNPYNSYDDRNLNMGTYRNDGWDSQARESDISGHQFDCNAFPQTLEELEMEYKRETTELGKIRDREEDEETFRHRETVRDMRENYMNKVAMLRATHAKQWEEFLQLDAQRRQQQAVQQMPTSGFGGYKQQNFSEYDGSTASPHYTGASLPLELRNRFSNTLENYPTRRHENFDEFQRRGDYPKAYNRF 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0329 582 MobiDBLite consensus disorder prediction 142 191 - -
Lele05g0329 582 MobiDBLite consensus disorder prediction 157 177 - -
Lele05g0329 582 MobiDBLite consensus disorder prediction 332 347 - -
Lele05g0329 582 MobiDBLite consensus disorder prediction 348 364 - -
Lele05g0329 582 PANTHER OS01G0252900 PROTEIN 128 581 - -
Lele05g0329 582 SUPERFAMILY Retrovirus zinc finger-like domains 199 231 IPR036875 GO:0003676|GO:0008270
Lele05g0329 582 Coils Coil 439 459 - -
Lele05g0329 582 MobiDBLite consensus disorder prediction 296 404 - -
Lele05g0329 582 ProSiteProfiles Zinc finger CCHC-type profile. 212 227 IPR001878 GO:0003676|GO:0008270
Lele05g0329 582 MobiDBLite consensus disorder prediction 296 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0329 Lele-ChrLele05 1877555 1882444 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0329 05 1877555 1882444 Lele05g0329 05 1877555 1882444 ECH
Lele05g0329 05 1877555 1882444 Lele07g0348 07 1932305 1934889 hybridization
Lele05g0329 05 1877555 1882444 Lele08g0150 08 917601 919111 hybridization