Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0337 ATGCTACGACCCCCATTTTCCCCAAAATCAGAGCTCAGAGTCTTCCCGGTACAAATGGCAACTATATACTTCATTGTTCAAACTCTGTTTACTCTGTTACTTAATTGGTTGCTCACACTTCCAGATTATGTTCCCGATTCCAAGTTTTACAAGGTGGAAGCGATTCTCAGGCCTTGGCGAATCCCTCAGGTTTCTTCGGCTTTGTTGAAATTGGGAATCCGTGGCGTCACAGTATCTGATGCCCGGGGATTTGGATCTCAGGGCGGTTCAAAAGAGAGGCAGGGAGGCTCCGAATTTTCTGAAGACAATTTTGTTGCCAAAGTTAAGATGGAAATAGTAGTGAGCAAGGGTCAGGTTGAAGCAGTTATAGACAATATTATCAAGGCATCAAGAACAGGGGAGATTGGTGATGGCAAAATTTTTTTGACACCTGTTGCAGATGTTATAAGAGTCCGCACAGGTGAACGTGGGGAAATGGCAGTGAGGATGACTGGTGGCCCAGCTTCTGCTGTATGA 516 0.4535 MLRPPFSPKSELRVFPVQMATIYFIVQTLFTLLLNWLLTLPDYVPDSKFYKVEAILRPWRIPQVSSALLKLGIRGVTVSDARGFGSQGGSKERQGGSEFSEDNFVAKVKMEIVVSKGQVEAVIDNIIKASRTGEIGDGKIFLTPVADVIRVRTGERGEMAVRMTGGPASAV 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0337 171 Pfam Nitrogen regulatory protein P-II 50 157 IPR002187 GO:0006808|GO:0030234
Lele07g0337 171 PRINTS P-II protein signature 132 152 IPR002187 GO:0006808|GO:0030234
Lele07g0337 171 PRINTS P-II protein signature 101 124 IPR002187 GO:0006808|GO:0030234
Lele07g0337 171 PRINTS P-II protein signature 71 89 IPR002187 GO:0006808|GO:0030234
Lele07g0337 171 PRINTS P-II protein signature 50 65 IPR002187 GO:0006808|GO:0030234
Lele07g0337 171 SUPERFAMILY GlnB-like 50 161 IPR011322 -
Lele07g0337 171 SMART P_II_3 52 154 IPR002187 GO:0006808|GO:0030234
Lele07g0337 171 ProSitePatterns P-II protein C-terminal region signature. 132 145 IPR017918 GO:0006808|GO:0030234
Lele07g0337 171 ProSiteProfiles P-II protein family profile. 49 161 IPR002187 GO:0006808|GO:0030234
Lele07g0337 171 PANTHER NITROGEN REGULATORY PROTEIN P-II 40 168 IPR002187 GO:0006808|GO:0030234
Lele07g0337 171 Gene3D - 39 171 IPR015867 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0337 Lele-ChrLele07 1877140 1879749 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g0337 07 1877140 1879749 Lele07g0337 07 1877140 1879749 ECH
Lele05g0320 05 1831064 1833873 Lele07g0337 07 1877140 1879749 hybridization
Lele06g0138 06 840184 842638 Lele07g0337 07 1877140 1879749 hybridization