Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0138 ATGATGACCTCGTCCGTGGCAAGATCGTACCTTTTGAGTCCTCCAAGCTCTCATCTCAAAAAATTCGAACTCCCTTTTCAAGATTTCAGATCAATTCCCCAGAGCTTCTGTAGTTCTGAATTTCATCGTCTCGCCCTGAGACACAAACGCAATGCTACGACCCCGATTTTCCCCAAAATCAGAGCTCAGAGTCTCCCCGATTTTGCTCCCGATTCCAATTTTTACAAGGTGGAAGCGATTCTCAGACCTTGGCGAATCCCTCCGGTTTCTTCGGCTTTGTTGAAATTGGGAATCCGTGGCGTCACAGTATCTGATGCCCGTGGCTTTGGATCTCAAGGTGGTTCAAAAGAGAGGCAGGGAGGCTCCGAATTTTCTGAAGACAATTTTGTTGCCAAAGTTAAGATGGAAATAGTAGTGAGCAAGGGTCAGGTTGAAGCGGTTATAGACAATATTATCAAGGCATCAAGAACAGGGGAGATTGGTGATGGCAAAATTTTTTTGACACCTGTTGCAGATGTTATAAGAGTCCGCACAGGTGAACGTGGGGAAGTGGCAGTGAGGATGACTGGTGGCCCAGCATCTGCTATATGA 591 0.4653 MMTSSVARSYLLSPPSSHLKKFELPFQDFRSIPQSFCSSEFHRLALRHKRNATTPIFPKIRAQSLPDFAPDSNFYKVEAILRPWRIPPVSSALLKLGIRGVTVSDARGFGSQGGSKERQGGSEFSEDNFVAKVKMEIVVSKGQVEAVIDNIIKASRTGEIGDGKIFLTPVADVIRVRTGERGEVAVRMTGGPASAI 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0138 196 Pfam Nitrogen regulatory protein P-II 75 182 IPR002187 GO:0006808|GO:0030234
Lele06g0138 196 SUPERFAMILY GlnB-like 75 186 IPR011322 -
Lele06g0138 196 PRINTS P-II protein signature 157 177 IPR002187 GO:0006808|GO:0030234
Lele06g0138 196 PRINTS P-II protein signature 75 90 IPR002187 GO:0006808|GO:0030234
Lele06g0138 196 PRINTS P-II protein signature 126 149 IPR002187 GO:0006808|GO:0030234
Lele06g0138 196 PRINTS P-II protein signature 96 114 IPR002187 GO:0006808|GO:0030234
Lele06g0138 196 ProSiteProfiles P-II protein family profile. 74 186 IPR002187 GO:0006808|GO:0030234
Lele06g0138 196 SMART P_II_3 77 179 IPR002187 GO:0006808|GO:0030234
Lele06g0138 196 ProSitePatterns P-II protein C-terminal region signature. 157 170 IPR017918 GO:0006808|GO:0030234
Lele06g0138 196 Gene3D - 63 196 IPR015867 -
Lele06g0138 196 PANTHER NITROGEN REGULATORY PROTEIN P-II 35 193 IPR002187 GO:0006808|GO:0030234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0138 Lele-ChrLele06 840184 842638 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0138 06 840184 842638 Lele06g0138 06 840184 842638 ECH
Lele06g0138 06 840184 842638 Lele07g0337 07 1877140 1879749 hybridization
Lele06g0138 06 840184 842638 Lele08g0139 08 849471 851912 hybridization