Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0320 ATGACCTCGACCATGGCAGGATCGTACCTTTTTAGTCCTCCAAACTATCATCTCAAAAAATTCGAACTCCCTTTTCAAGATTACAGATCGATTGCCCAGAACTTGTGTTGTTCTGAATTTCCTTGCCTCGCCCTGAGACACAAACGCAATGCTACGAACCCGATTTTCCCCAAAATCAGAGCTCAGAGTCTTCCCGATTATGTTCCCGATTCCAAGTTTTACAAGGTGGAAGCGATTCTCAGGCCTTGGCGAATCCCTCAGGTTTCTTCGGCTTTGTTGAAATTGGGAATCCGTGGCGTCACAGTATCTGATGCCCGGGGCTTTGGATCTCAGGGTGGTTCAAAAGAGCGGCAGGGAGGCTCCGAATTTTCTGAAGACAATTTTGTTGCCAAAGTTAAGATGGAAATAGTAGTGAGCAAGGGTCAGGTTGAAGCAGTTATAGACAATATTATCAAGGCATCAAGAACAGGGGAGATTGGTGATGGCAAAATTTTTTTGACACCTGTTGCAGATGTTATAAGAGTCCGCACAGGTGAACGTGGGGAAATGGCAGTGAGGATGACTGGTGGCCCAGCTTCTGCTGTATGA 588 0.4626 MTSTMAGSYLFSPPNYHLKKFELPFQDYRSIAQNLCCSEFPCLALRHKRNATNPIFPKIRAQSLPDYVPDSKFYKVEAILRPWRIPQVSSALLKLGIRGVTVSDARGFGSQGGSKERQGGSEFSEDNFVAKVKMEIVVSKGQVEAVIDNIIKASRTGEIGDGKIFLTPVADVIRVRTGERGEMAVRMTGGPASAV 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0320 195 Pfam Nitrogen regulatory protein P-II 74 181 IPR002187 GO:0006808|GO:0030234
Lele05g0320 195 PANTHER NITROGEN REGULATORY PROTEIN P-II 38 192 IPR002187 GO:0006808|GO:0030234
Lele05g0320 195 ProSitePatterns P-II protein C-terminal region signature. 156 169 IPR017918 GO:0006808|GO:0030234
Lele05g0320 195 PRINTS P-II protein signature 74 89 IPR002187 GO:0006808|GO:0030234
Lele05g0320 195 PRINTS P-II protein signature 156 176 IPR002187 GO:0006808|GO:0030234
Lele05g0320 195 PRINTS P-II protein signature 95 113 IPR002187 GO:0006808|GO:0030234
Lele05g0320 195 PRINTS P-II protein signature 125 148 IPR002187 GO:0006808|GO:0030234
Lele05g0320 195 SMART P_II_3 76 178 IPR002187 GO:0006808|GO:0030234
Lele05g0320 195 ProSiteProfiles P-II protein family profile. 73 185 IPR002187 GO:0006808|GO:0030234
Lele05g0320 195 SUPERFAMILY GlnB-like 74 185 IPR011322 -
Lele05g0320 195 Gene3D - 61 195 IPR015867 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0320 Lele-ChrLele05 1831064 1833873 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0320 05 1831064 1833873 Lele05g0320 05 1831064 1833873 ECH
Lele05g0320 05 1831064 1833873 Lele07g0337 07 1877140 1879749 hybridization
Lele05g0320 05 1831064 1833873 Lele08g0139 08 849471 851912 hybridization