Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0317 ATGGTTAAGGCTTCACTGTCACTTTGCTTTCGCCGACGTGTTGATAGAGGAGCCAAGGGAAACAGCTCGACCGCTGTCAAAGATGCTTATCTTGATGAGTGTAGCATCAGGATGGCCGGAGCTGGAGCTAACAAGCCCACTGCAAAACAGTCTGGTGGGAAGAAGAAAGAGGTGAAGAAAGAGACAGGTTTAGGGCTTTCAAATCGAAAGGCAGACAACTTTGGGGAGTGGTACTCTGAGGTAGTTGTCAATGGGGAAATGATTGAGTACTATGACATTTCCGGATGTTACATTCTTAGGCCATGGGCAATGTCAATCTGGGAGGAGATGCAAGCCTTCTTTGATGCAGAGTTAAAGAAAATGAAAGTCAAGAACTGCTACTTCCCTTTATTTGTGTCTCCTGGCGTTTTGCAAAAGGAGAAGGATCATGTTGAGGGCTTTGCACCAGAGGTTGCTTGGGTGACAAAGTCTGGGGAAACTGATCTAGAGATTCCTATTGCTATCCGTCCGACTAGTGAAACTGTCATGTATCCATACTACTCTAAGTGGATAAGGGGACATCGTGATTTGCCTTTGAGACTTAATCAATGGTGCAATGTTGTTAGATGGGAGTTCAGTAATCCCACGCCATTCATCAGGAGCCGTGAGTTTCTTTGGCAGGAAGGGCATACTGCTTTTGCGACCAAGGAGGAGGCAGATGCAGAGGTCCTCGAGGTATTGGAATTGTATAGGCGTATATATGAAGAATATCTTGCAATTCCCGTCATAAAGGGTAAGAAAAGTGAGCTGGAGAAGTTTGCTGGTGGACTTTACACCACTAGTGTTGAGGCATTTATTCCAAACACTGGTCGTGGCATACAAGGTGCAACTTCTCATTGTCTTGGCCAAAATTTTGCTAAAATGTTTGAGATAAATTTTGAAAATGAGAAGGGAGAGAAAGCAATGGTCTGGCAGAACTCATGGGCCTATAGCACTCGAACTATTGGGGTCATGGTGATGGTTCATGGGGATGACAAAGGGCTTGTGCTGCCACCTAAAGTAGCATCAGTGCAAGTCATTGTGATTCCAGTGCCTTATAAAGATGCTGATACTCAAGGTATTCTTGATGCCTGCTCTGCCACTGTGAATGCCTTATGTGAAGCAGGTATTCGTGCTGAGTCAGACTTTAGAGATAACTATTCTCCTGGTTGGAAGTATTCACACTGGGAAATGAAAGGTGTTCCCCTAAGGATTGAAATTGGGCCAAAGGATTTGGCAAATAAGCAGGTGCGTGCTGTTCGACGTGATAATATGGGAAAAATAGACATACCCATGGAAGATTTGGTCAAGCAAGTCCAAGATCTGCTGCATAATATTCAACAAAACCTATTTGATGTGGCCAAACAAAAACGAGATGCATGCATTCAGGTTGTATATACTTGGGATGAATTTGTGGAAGCATTGAGCCAACGGAAAATGATCTTGGCTCCTTGGTGTGATGAGGAGTCCGTTGAAGTAGATGTGAAAGCAAGGACAAAGGGTGAGATGGGAGCAGCTAAGACGCTTTGTAGCCCCTTTGATCAACCAGAACTCCCTGAAGGCAACAAGTGCTTTGCATCAGGAAAGCCGGCTAAGAAGTGGACATACTGGGGCAGAAGTTACTAG 1644 0.4477 MVKASLSLCFRRRVDRGAKGNSSTAVKDAYLDECSIRMAGAGANKPTAKQSGGKKKEVKKETGLGLSNRKADNFGEWYSEVVVNGEMIEYYDISGCYILRPWAMSIWEEMQAFFDAELKKMKVKNCYFPLFVSPGVLQKEKDHVEGFAPEVAWVTKSGETDLEIPIAIRPTSETVMYPYYSKWIRGHRDLPLRLNQWCNVVRWEFSNPTPFIRSREFLWQEGHTAFATKEEADAEVLEVLELYRRIYEEYLAIPVIKGKKSELEKFAGGLYTTSVEAFIPNTGRGIQGATSHCLGQNFAKMFEINFENEKGEKAMVWQNSWAYSTRTIGVMVMVHGDDKGLVLPPKVASVQVIVIPVPYKDADTQGILDACSATVNALCEAGIRAESDFRDNYSPGWKYSHWEMKGVPLRIEIGPKDLANKQVRAVRRDNMGKIDIPMEDLVKQVQDLLHNIQQNLFDVAKQKRDACIQVVYTWDEFVEALSQRKMILAPWCDEESVEVDVKARTKGEMGAAKTLCSPFDQPELPEGNKCFASGKPAKKWTYWGRSY 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0317 547 MobiDBLite consensus disorder prediction 42 62 - -
Lele07g0317 547 CDD ProRS_core_arch_euk 73 334 IPR033721 -
Lele07g0317 547 FunFam Bifunctional glutamate/proline--tRNA ligase 66 344 - -
Lele07g0317 547 Hamap Proline--tRNA ligase [proS]. 67 547 IPR004499 GO:0004827|GO:0005524|GO:0005737|GO:0006433
Lele07g0317 547 Gene3D Bira Bifunctional Protein; Domain 2 67 344 IPR045864 -
Lele07g0317 547 SUPERFAMILY Class II aaRS ABD-related 339 465 - -
Lele07g0317 547 Pfam tRNA synthetase class II core domain (G, H, P, S and T) 167 332 IPR002314 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Lele07g0317 547 Pfam Prolyl-tRNA synthetase, C-terminal 474 547 IPR016061 GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433
Lele07g0317 547 FunFam Proline--tRNA ligase, cytoplasmic 468 547 - -
Lele07g0317 547 PANTHER PROLYL-TRNA SYNTHETASE 43 547 IPR004499 GO:0004827|GO:0005524|GO:0005737|GO:0006433
Lele07g0317 547 SUPERFAMILY Class II aaRS and biotin synthetases 72 338 IPR045864 -
Lele07g0317 547 SUPERFAMILY C-terminal domain of ProRS 470 547 IPR017449 GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433
Lele07g0317 547 Pfam Anticodon binding domain 351 447 IPR004154 -
Lele07g0317 547 FunFam bifunctional glutamate/proline--tRNA ligase 345 465 - -
Lele07g0317 547 PRINTS Prolyl-tRNA synthetase signature 125 143 IPR002316 GO:0004827|GO:0005524|GO:0005737|GO:0006433
Lele07g0317 547 PRINTS Prolyl-tRNA synthetase signature 196 204 IPR002316 GO:0004827|GO:0005524|GO:0005737|GO:0006433
Lele07g0317 547 PRINTS Prolyl-tRNA synthetase signature 166 177 IPR002316 GO:0004827|GO:0005524|GO:0005737|GO:0006433
Lele07g0317 547 PRINTS Prolyl-tRNA synthetase signature 206 217 IPR002316 GO:0004827|GO:0005524|GO:0005737|GO:0006433
Lele07g0317 547 SMART ProRS_C_1_2 474 547 IPR016061 GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433
Lele07g0317 547 CDD ProRS_anticodon_zinc 340 547 - -
Lele07g0317 547 Gene3D - 345 465 IPR036621 -
Lele07g0317 547 Gene3D - 468 547 IPR017449 GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433
Lele07g0317 547 ProSiteProfiles Aminoacyl-transfer RNA synthetases class-II family profile. 106 344 IPR006195 -
Lele07g0317 547 TIGRFAM proS_fam_I: proline--tRNA ligase 69 547 IPR004499 GO:0004827|GO:0005524|GO:0005737|GO:0006433
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0317 Lele-ChrLele07 1751753 1757813 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0299 05 1682518 1687397 Lele07g0317 07 1751753 1757813 hybridization
Lele06g0114 06 709539 715253 Lele07g0317 07 1751753 1757813 hybridization