Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0290 ATGGCTTACTATCTTTTCACTCTGATTACTTTGTTTCTAGCTTTATCCGCCCTCTCTCTCCAGATCACTGAGGCAGAAGTAGAAGAACTTCCCAGTCTCAAGCTTAACTCTCATATCCTCCAGGAGTCTATTGTTGAACAGATTAATGGAAATCCAAAAGCAGGGTGGAAGGGTGCCTTGAGTCCCCGTTTCTCTAATTATACAGTTGGACAATTTAAGCACCTTCTAGGGGTCAAGCAAACACCTAGAAAGGAATTAAGAAGTGCTCCTGTCAAAACTCATCCAAAAGCATTAAAATTACCAAATGAGTTTGATTCAAGAACAGCTTGGAAGCAGTGTAGCACAATTGGAAGAATTCTAGTTGCTGACTCTTCTTCTTTGATGAACACATGGAATGGTCACTGTGGTTCTTGCTGGGCATTCGGCGCTGTTGAATCATTATCAGATCGTTTCTGCGTCCATTTTGGCATGAATGTGTCGCTTTCTGTTAATGACCTTCTCTCTTGCTGTGGATTTTTGTGTGGAGCGGGCTGTGATGGAGGTGACCCCCTCAGTGCATGGCAATACCTTGTCCGCCAGGGTGTTGTTACTGAAGAGTGTGACCCATACTTTGATCAGATTGGTTGTTCTCACCCTGGTTGCGAGCCTGCATTTCCAACACCTTTGTGTGAGAGAAAGTGCGTCAATGGTAACCAGCTTTGGAGCCAGTCAAAGCACTATAGTGATAATGCATATAGGGTCAACTCTGATCCCTATGATATCATGACAGAAGTTTATAAGAATGGGCCGGTTGAGGTTGCTTTCACAGTTTATGAGGATTTCGCTCACTACAAATCAGGAGTATACAGACACGTCGCAGGTTCCATGATGGGAGGTCATGCTGTGAAGCTAATTGGGTGGGGAACCACTGATGATGGAGAGGACTATTGGCTTCTCGCAAATCAGTGGAATAGAAGTTGGGGTGATGATGGCTATTTCAAGATCAGAAGAGGCACAAACGAGTGTGGTATTGAAGAAGACGTTGTCGCCGGTTTGCCTTCCACTAAAAATCTGGTGTTGGAGGTAGCTGATGTGGACGACGACGCGGCTGTTTCATTCTGA 1101 0.4487 MAYYLFTLITLFLALSALSLQITEAEVEELPSLKLNSHILQESIVEQINGNPKAGWKGALSPRFSNYTVGQFKHLLGVKQTPRKELRSAPVKTHPKALKLPNEFDSRTAWKQCSTIGRILVADSSSLMNTWNGHCGSCWAFGAVESLSDRFCVHFGMNVSLSVNDLLSCCGFLCGAGCDGGDPLSAWQYLVRQGVVTEECDPYFDQIGCSHPGCEPAFPTPLCERKCVNGNQLWSQSKHYSDNAYRVNSDPYDIMTEVYKNGPVEVAFTVYEDFAHYKSGVYRHVAGSMMGGHAVKLIGWGTTDDGEDYWLLANQWNRSWGDDGYFKIRRGTNECGIEEDVVAGLPSTKNLVLEVADVDDDAAVSF 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0290 366 CDD Peptidase_C1A_CathepsinB 101 344 - -
Lele07g0290 366 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 291 301 IPR025660 -
Lele07g0290 366 Pfam Papain family cysteine protease 132 344 IPR000668 GO:0006508|GO:0008234
Lele07g0290 366 SMART pept_c1 100 345 IPR000668 GO:0006508|GO:0008234
Lele07g0290 366 Pfam Peptidase family C1 propeptide 40 82 IPR012599 GO:0004197|GO:0050790
Lele07g0290 366 SUPERFAMILY Cysteine proteinases 48 346 IPR038765 -
Lele07g0290 366 PRINTS Papain cysteine protease (C1) family signature 293 303 IPR000668 GO:0006508|GO:0008234
Lele07g0290 366 PRINTS Papain cysteine protease (C1) family signature 132 147 IPR000668 GO:0006508|GO:0008234
Lele07g0290 366 PRINTS Papain cysteine protease (C1) family signature 309 315 IPR000668 GO:0006508|GO:0008234
Lele07g0290 366 FunFam cathepsin B-like protease 2 33 351 - -
Lele07g0290 366 Gene3D Cysteine proteinases 32 352 - -
Lele07g0290 366 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 53 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0290 Lele-ChrLele07 1597594 1601165 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0272 05 1543318 1546884 Lele07g0290 07 1597594 1601165 hybridization
Lele06g0092 06 570120 572454 Lele07g0290 07 1597594 1601165 hybridization