Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0092 ATGAATGTATCGCTCTCTGTTAATGACCTTCTCTCTTGCTGTGGATTTTTGTGTGGAGCTGGCTGTGATGGAGGTTACCCCCTCAACGCATGGCAATACCTTGTCCGCCAGGGTGTTGTTACTGAAGAGTGTGACCCATACTTTGATCAGATTGGTTGTTCTCACCCTGGTTGCGAGCCTGCATTTCCAACACCTATGTGTGAGAGAAAGTGCATCAATGGTAACCAGCTTTGGAGCCAGTCAAAGCACTATAGTGATAATTCATATAGGGTCAACTCTGATCCCTATGATATAATGACAGAAGTTTATAAGAATGGGCCGGTTGAGGTTTCTTTCACAGTTTATGAGGATTTCGCTCACTACAAATCAGGAGTATACAAACACGTCACAGGTTTCGTGATGGGAGGTCATGCTGTGAAGCTAATTGGGTGGGGAACCACTGATGATGGAGAGGACTATTGGCTTCTGGCAAATCAGTGGAATAGAAGTTGGGGTGATGATGGCTACTTCAAGATCAGAAGAGGCACAAACGAGTGTGGTATTGAAGAAGAAGTTGTCGCCGGTTTGCCTTCCACTAAAAATCTTGTGTTGGATGTGGCTGACGTGGACGTCGATGCTGTTGCTTCATTCTGA 633 0.455 MNVSLSVNDLLSCCGFLCGAGCDGGYPLNAWQYLVRQGVVTEECDPYFDQIGCSHPGCEPAFPTPMCERKCINGNQLWSQSKHYSDNSYRVNSDPYDIMTEVYKNGPVEVSFTVYEDFAHYKSGVYKHVTGFVMGGHAVKLIGWGTTDDGEDYWLLANQWNRSWGDDGYFKIRRGTNECGIEEEVVAGLPSTKNLVLDVADVDVDAVASF 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0092 210 FunFam cathepsin B-like protease 2 1 195 - -
Lele06g0092 210 Gene3D Cysteine proteinases 1 198 - -
Lele06g0092 210 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 135 145 IPR025660 -
Lele06g0092 210 CDD Peptidase_C1A_CathepsinB 1 188 - -
Lele06g0092 210 SUPERFAMILY Cysteine proteinases 2 190 IPR038765 -
Lele06g0092 210 Pfam Papain family cysteine protease 2 188 IPR000668 GO:0006508|GO:0008234
Lele06g0092 210 SMART pept_c1 2 189 IPR000668 GO:0006508|GO:0008234
Lele06g0092 210 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 3 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0092 Lele-ChrLele06 570120 572454 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0092 06 570120 572454 Lele07g0290 07 1597594 1601165 hybridization
Lele06g0092 06 570120 572454 Lele08g0093 08 555652 559574 hybridization