Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0278 ATGAGAATTCGAAGTGCGTTAGCTTTGATTAATCTAATCCCTTCTTTGGACGAGACGGAGAAAGTTGAAACGACAGGATTATCTTCTACTCGGAACCGATGGTCATATATATACCTAACTATGAAGTTCTCGCTCTCGCTGCTTCTCCTCCCTCTTGCTGTGCTTTTTGCTGCTGTTGCCGCAGCTGATCCCGACGCTCTCCAAGACCTCTGTGTCGCCGATCTTACCTCCGCGATTAAAGTAAACGGGTTCGTGTGCAAGGATGCTTCGAAGGTTAAGGCCTCAGACTTCTTCTCCGACATACTGGCCAAACCAGGAGCCACCAATAACACCTTTGGCTCATTGGTCACCGGAGCCAACGTTCAGAAAGTCCCCGGCCTCAACACCCTCGGAGTCTCACTCTCACGCATTGACTACGCGCCTGGTGGCATCAACCCACCCCACACCCACCCACGCGCCACCGAGATGGTTTTTGTGCTCAAAGGTGAACTTTTCGTCGGCTTCATAACCACGTCCAATCAGCTCATATCTAAGAAGATTCAGAAGGGTGAGACCTTTGTGTTCCCGAAAGGTTTGGTTCATTTCCAAAAGAACATTGGACATCAAGCCGCCTCTGTAATTGCGGCATTCAATAGTCAGCTTCCTGGTACGCAGTCTATCGCCACCACCTTGTTCGCCTCCACGCCGCCGGTGCCGGACAATGTTTTGGCACAGGCGTTCCAGGTGGGTACCAAGGAGGTTGAGAAAATCAAGTCTGGGCTTGCACCCAAGTAG 774 0.5116 MRIRSALALINLIPSLDETEKVETTGLSSTRNRWSYIYLTMKFSLSLLLLPLAVLFAAVAAADPDALQDLCVADLTSAIKVNGFVCKDASKVKASDFFSDILAKPGATNNTFGSLVTGANVQKVPGLNTLGVSLSRIDYAPGGINPPHTHPRATEMVFVLKGELFVGFITTSNQLISKKIQKGETFVFPKGLVHFQKNIGHQAASVIAAFNSQLPGTQSIATTLFASTPPVPDNVLAQAFQVGTKEVEKIKSGLAPK 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0278 257 PRINTS Germin signature 148 168 IPR001929 GO:0030145
Lele07g0278 257 PRINTS Germin signature 178 198 IPR001929 GO:0030145
Lele07g0278 257 PRINTS Germin signature 211 226 IPR001929 GO:0030145
Lele07g0278 257 Gene3D Jelly Rolls 62 256 IPR014710 -
Lele07g0278 257 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 56 252 - -
Lele07g0278 257 Pfam Cupin 102 247 IPR006045 -
Lele07g0278 257 CDD cupin_OxOx 67 254 - -
Lele07g0278 257 ProSitePatterns Germin family signature. 143 156 IPR019780 GO:0030145
Lele07g0278 257 SMART Cupin_1_3 99 248 IPR006045 -
Lele07g0278 257 FunFam germin-like protein subfamily 2 member 1 62 256 - -
Lele07g0278 257 SUPERFAMILY RmlC-like cupins 63 253 IPR011051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0278 Lele-ChrLele07 1521869 1523798 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0278 49 257 Miscellaneous Gene Families AT3G05930 57.477 3.46e-86 254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0261 05 1473281 1474141 Lele07g0278 07 1521869 1523798 hybridization
Lele06g0079 06 507956 512149 Lele07g0278 07 1521869 1523798 hybridization