Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0258 ATGGCTTCCGCTGGCCACAATAATCCCGTTCACGGCCTCGAAGATCACAATCACACCAACGGCTTCGCCCTTTCCCACATGCCCAAAAAGCTCAAGCTCTCTTCTCCTTCTTCTCCACCTTTCATCACCGACTCCGAAATTGAATCCGAGTTCTCTCACCACGACCCTGTCGTTGCCCGACTCAACAACGGCGCCTTCGGTTGCTGCCCTGCTTCTGTTATTTCTGCTCATCAAGAATGGCATCTTAAATATCTCCGTCAACCCGACGATTTCTACTTCAACCACCTCCAGAAGGGGATTCTTCAATCCAGGACCATAATAAAAGACCTTGTTAACGCGGAACACCTTGACGAGATTTCCATCGTCGATAACGCCACCACAGCCGCTGCTATTGTTCTCCGGCAGGTCGCCTGGGCTTTTCGCAAAGGCAAATTCCCAAAAGGCGATGTCGTCATTATGCTTCATTACGCTTATGGAGCGGTCAAGAAGTCAATAGAGGCCTATTTTGTACGTTCTGGAGGTGAAGTTATCGAAGTTCACCTACCTTTTCCGGTGAGTTCTGATCAGGAGATCATAACCGAATTCAGGAGGGCCTTGGAGAGAGGAAAGGCCGATGGTAAGAGGATTAGATTAGCTGTGATCGATCACATCACTTCAATGCCCAGCGTGGTCATTCCAGTTAAGGAGCTGGTTAAGATTTGCAGGGAAGAAAATATTGAACAAGTTTTCGTGGATGCTGCTCATGCTATTGGTTGCACAGATGTTGATATGAAGGAGATTGGTGCAGACTTCTACGCTAGCAATTTGCACAAATGGTTCTTTTGTCCTCCTTCGATTGCCTTCTTCTATTGTCGCAGGTCGACCAAATCCTGTGATATGCACCATCCCGTGGTGTCTCATGAGTATGGCAACGGATTGGCCATAGAATGTTCTTGGATTGGCACGAGAGATTATAGTCCCCAGTTGGTTGTTCCTGCGGTTTTAAGGTTTGTGGACAGATTCGAAGGTGGTATTGAAGGGATTAAGAAGAGGAATCATGATGTTGTTGTAGAGATGGGAGAGATGTTGGCCCAAGCATGGGGGACTCATCTGGGGGCTCCTCCACATATGTGTGCCAGCATGATCATGGTGGGCTTGCCTGCTTCTTTGGGGATTACTTGTGATTCTGATGCTATCAAGTTAAGGAATCATTTGAGGGATAATCTTGGGATTGAAGTCCCAATATATTATAGGACTCCAACAGATGGGGAGGTTGAATCCTTGACTGTGACTGGATATGCTCGAATATCTCACCAAGTATATAACAAGGTTGATGATTATTACAAGTTCAGGGATGCCATTAATCAACTTGTACACGATGGCTTTACTTGTGCTCTTCTGTCTGATTGA 1389 0.4651 MASAGHNNPVHGLEDHNHTNGFALSHMPKKLKLSSPSSPPFITDSEIESEFSHHDPVVARLNNGAFGCCPASVISAHQEWHLKYLRQPDDFYFNHLQKGILQSRTIIKDLVNAEHLDEISIVDNATTAAAIVLRQVAWAFRKGKFPKGDVVIMLHYAYGAVKKSIEAYFVRSGGEVIEVHLPFPVSSDQEIITEFRRALERGKADGKRIRLAVIDHITSMPSVVIPVKELVKICREENIEQVFVDAAHAIGCTDVDMKEIGADFYASNLHKWFFCPPSIAFFYCRRSTKSCDMHHPVVSHEYGNGLAIECSWIGTRDYSPQLVVPAVLRFVDRFEGGIEGIKKRNHDVVVEMGEMLAQAWGTHLGAPPHMCASMIMVGLPASLGITCDSDAIKLRNHLRDNLGIEVPIYYRTPTDGEVESLTVTGYARISHQVYNKVDDYYKFRDAINQLVHDGFTCALLSD 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0258 462 MobiDBLite consensus disorder prediction 1 21 - -
Lele07g0258 462 SUPERFAMILY PLP-dependent transferases 56 451 IPR015424 -
Lele07g0258 462 PANTHER L-CYSTEINE DESULFHYDRASE 40 458 - -
Lele07g0258 462 Pfam Aminotransferase class-V 70 289 IPR000192 -
Lele07g0258 462 Gene3D - 72 329 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0258 Lele-ChrLele07 1408570 1409958 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g0258 07 1408570 1409958 Lele07g0258 07 1408570 1409958 ECH
Lele05g0246 05 1375156 1376544 Lele07g0258 07 1408570 1409958 hybridization
Lele06g0061 06 398036 405607 Lele07g0258 07 1408570 1409958 hybridization