Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0061 ATGGCCTCCGATGGCCACAATAATCACGTTCACAGCCACGAATACCACAATCACGCCATGCCCAAAAAGCTCAAGCTCTCGTCTCCTTCTTCTTCACCTTTCAATTTCATTACTGACTACGAAATTGAATCCGAGTTCCCTCACCACGACCCTGCCGTTGACCGACTCAACAGCGGCGTCTTCGCCGCTGCTATTGTTCTACGGCAGGTCGCTTGGGCTTTCCGCGAAGGCAAATTCCAAAAAGGGGATGTCGTCATTATGCTTCCTTACGCATATGGAGCTGTCAAGAAGTCAATAGAGGCCTATGTCGTACGTTCCGGAGGTGAAGTCATCGAAGTTCACCTACCTTTTCCGGTGAGTTCTGATCAGGAGATCATAAGCGAATTCAGAAGGGTATCGGAGAGAGGAAAGGCGGATGGTAAGAGGGTTAGATTAGCTGTGATCGATTATGTCACTTCAATGCGCAGCGTGGTGATTCCAGTGAAGGAACTGGTTAAGATTTGCAGGAGGAAAATGTTGAACAAGTCTTCGTGGATGCAGCTCATGCTATTGGGGGCACAGATGTCGCCCAAGTCCTGTGAAGTGCACCATCTTGTGGTGTCTCATGAATATGGGAACGGGTTAGCCATAGAATGTTCTTGGATTGGCACGAGAGATTATAGTCCCCAGCTGGTTGTTGTTGCAGTTTTGAGAGATGTTGGCCCAAGCATGGGGGACTCATCTGGGACTCCTCCACATATGCTTGCCAGCATGATCATGGTAGAGTTGCCTGCTTCACGGGGGATTACTTGTGATTCTGATGCTATCAAGTTGAGGAATCATTTGAGGTATAATCTTGGGATTGAAGTCCCGATATATCATAGGACTCCAAGAGATGGGGAGGCGATGGATTTACTTGTGCTCTTCTGCCTGATTGAATGCTTTCTCAACTTCAAGGTCCATAGATTCCGTTCATATGCCACATTTGAAATCATGGCTGGAAAGAAGATAATAGCAATATGTCAGTCTGGAGGTGAATTTGAGACTGAGAAAGATGGTTCTTTGTCATATAGAGGCGGTGATGCTCATGCTATTGACGTTGATGATCAAATGAAGTTTAGTGAGTTTAAAGAGGAAGTAGCGGAAATGTTTAATTTCAGTGTCAATAGCATGTCTATCAAGTATTTTCTTCCACGGAACCATAAGACTCTCATTACAATCTCTAATGACAAGGATCTAACACGGATGGTTAAATTTCATGGAGATTCAAGTTCTGTTGAGATTTATATCTTCATTGAGGATGTAATTTCCCCTGACACGTCAAGCATGCCTGCCAGTAGGTCAAGCAGAACAACCTTGTCTGAAACAGTGGTTCCAATTGATGCTGTCGGCGGTGTCATGGATGACAGTACCCAGACAGTGATTCCGCATGATGGAGCACTTGAAGTTGTTGATGATGCCAATCAAGTGCCCCCGTACTTGGCAAACGTTATCTCAAATGATGATAAGCACGCCAAAGGAGCACAGCAATGGCAGAATGCTATCACGGGTGTAGGTCAAAGGTTCAGTAGTGTTAATGAATTTCGTGAATCATTGCGTACATATGCCATTGCCCATCAATTTGCCTTTAGGTTGTCAACTACTCAATTGATATGCATCAAGAAAATGAATCCAACTCATATTTGTGAAGGTGCTGTTGCAACGACAGGGCATCAAGCGACTAGGAATGCAGATGATGATGTATTTCCCCTTGCTTTTGCTATTGTTGATGCTGAATCTGATGATAACTGGCATTGGTTCTTGCTTCAACTCAAATCCGTGCTGTCAACATCCTGTCCCATAACATTTGTAGCAGATAGAGAGAAAGGGTTGAAAAATTCAATTGCTGAAGTATTTTCCGGTTCATTTCATGGATATTGCCTACGGTATTTGATCGAGCAACTGTTTAGAGATTTGAAAGGGCAATTTTCTCATGAGGGTGCCAGGTATAATCACATGACATCAAACTTTGGGGAACTGTTTTATAGCTGGGCATCAGATGCAGATGGTTTGCCAATAACACAGATGGTTGAGGTGATAAGGGGTAAGATTATGGAGTTGCTTATTACAAGAAGGGCAGCTTCTGATCAGTGGTTGACTAGGCTAACCCCTTCCAAGGAGGTGAAGCTCGAAAATGAAAGTAGGCAGGCTCATTCACTTCAAGTTCTGTTGTCAGCTGCTAGCACATGCGAGGTTCGTGGAGACTCTGTTGAGGTGGTTGATATTGATCGGTGGGATTGTAGTTGCAAAGGCTGGCAGCTAACTGGTATACCATGCTGCCATGCTATTGCTGTCATCCATGGCATTGGCCGGAGTTTTTATGATTATTGCTCCAGATACTTCACAACGGAAAGTTACAGATTGACTTATTCAGAATCTTTACATCCTATTCCAAGTGTGGATTTTCCGGCCCTAAGAGGTTCTGAACTTATGGTAACCGTAACACCTCCTCCCACCAGACGACCACCAGGTCGACCTACAACAAAGCGAGATGGATCACATGGCATAGTCAAGCGTCAGCTCCAGTGCAGCCGATGCAGGGGACTTGGCCACAACAAGTCCACTTGTAAGGAGCCATGTAGAGTATTGGACAAAGGTATACAGAACAATCTAGCTTACTTGAGCTTGAATTCATTATTGAGTTGTCAGGGGGCTGACTTATTTCTTGCCGTTGTCCATGAGCAATATCTGGATGACCCTCAACTAATGTATTCTAATTTTGGACAGAATTTCAGCGGCAGCTGTGGCTTCAAAAACCGTTGGCTTCTCCACCACGTTCAGCTTCGCGGCATCGATCGCCGCCTCTGCACCTCTTGCGTCCTCCGTCTTCATCCTTCTTCCTTCTGCCCCTCTTGCTTCGAATTTTTCGATCACCCTTTGTCTTCTACCTCCTCTGCCTCTGCCCATCGCTTCCTCTCCTGTATAAAATGCTCCTCTCTCACTCACATTCAGTGTCTCCCTCCTCCTCCTCCTCCTCATTCCTTTTTCCTCTGTCCTCCCTGCTCCACTCCCAACTTCTTCTACGACCTTGATAAATCCAACTCTGGCTCAACTAAAACCCGGCCCTTCCTCGAAAAAAAGCTTGCTCTGGCGCTTCTCTGTGCTGCGAAGATCGCTTATGCGTCCATGAACAAGGCTGTGACCGTGGCCAGAGCCAAAGCCGATAGGACCGTTAGGGAGGCTGCCTTGGCTCGCAAGAGAGCTGAAGAGGTATTGCAGCAATTCTCAGTAGCTCTCAAGGTTCGGCGTATCGAGGGTTCCGTGCATGTTTCTGGGTCTAGGAACTTGGGCGCGAGGGATAGAGATAAGATTCCGAAGGTTACCGATCCTGGAGTGAGGTCTAACGGAAAAAAATATTTTATTGGTTGTACAAGATTCCATAAGGCGCCTTCATTGTCGCCCCAGAATGTATCGTCTGGGACTGCTAAAGAGGCTGATCAGAAAAATGTGGCTGCTGATTAA 3480 0.4598 MASDGHNNHVHSHEYHNHAMPKKLKLSSPSSSPFNFITDYEIESEFPHHDPAVDRLNSGVFAAAIVLRQVAWAFREGKFQKGDVVIMLPYAYGAVKKSIEAYVVRSGGEVIEVHLPFPVSSDQEIISEFRRVSERGKADGKRVRLAVIDYVTSMRSVVIPVKELVKICRRKMLNKSSWMQLMLLGAQMSPKSCEVHHLVVSHEYGNGLAIECSWIGTRDYSPQLVVVAVLRDVGPSMGDSSGTPPHMLASMIMVELPASRGITCDSDAIKLRNHLRYNLGIEVPIYHRTPRDGEAMDLLVLFCLIECFLNFKVHRFRSYATFEIMAGKKIIAICQSGGEFETEKDGSLSYRGGDAHAIDVDDQMKFSEFKEEVAEMFNFSVNSMSIKYFLPRNHKTLITISNDKDLTRMVKFHGDSSSVEIYIFIEDVISPDTSSMPASRSSRTTLSETVVPIDAVGGVMDDSTQTVIPHDGALEVVDDANQVPPYLANVISNDDKHAKGAQQWQNAITGVGQRFSSVNEFRESLRTYAIAHQFAFRLSTTQLICIKKMNPTHICEGAVATTGHQATRNADDDVFPLAFAIVDAESDDNWHWFLLQLKSVLSTSCPITFVADREKGLKNSIAEVFSGSFHGYCLRYLIEQLFRDLKGQFSHEGARYNHMTSNFGELFYSWASDADGLPITQMVEVIRGKIMELLITRRAASDQWLTRLTPSKEVKLENESRQAHSLQVLLSAASTCEVRGDSVEVVDIDRWDCSCKGWQLTGIPCCHAIAVIHGIGRSFYDYCSRYFTTESYRLTYSESLHPIPSVDFPALRGSELMVTVTPPPTRRPPGRPTTKRDGSHGIVKRQLQCSRCRGLGHNKSTCKEPCRVLDKGIQNNLAYLSLNSLLSCQGADLFLAVVHEQYLDDPQLMYSNFGQNFSGSCGFKNRWLLHHVQLRGIDRRLCTSCVLRLHPSSFCPSCFEFFDHPLSSTSSASAHRFLSCIKCSSLTHIQCLPPPPPPHSFFLCPPCSTPNFFYDLDKSNSGSTKTRPFLEKKLALALLCAAKIAYASMNKAVTVARAKADRTVREAALARKRAEEVLQQFSVALKVRRIEGSVHVSGSRNLGARDRDKIPKVTDPGVRSNGKKYFIGCTRFHKAPSLSPQNVSSGTAKEADQKNVAAD 1159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0061 1159 SMART PB1_new 343 428 IPR000270 GO:0005515
Lele06g0061 1159 MobiDBLite consensus disorder prediction 819 842 - -
Lele06g0061 1159 Gene3D - 56 177 IPR015421 GO:0003824
Lele06g0061 1159 Gene3D - 349 426 - -
Lele06g0061 1159 Pfam MULE transposase domain 569 637 IPR018289 -
Lele06g0061 1159 ProSiteProfiles Zinc finger SWIM-type profile. 744 776 IPR007527 GO:0008270
Lele06g0061 1159 Pfam MuDR family transposase 507 540 IPR004332 -
Lele06g0061 1159 SUPERFAMILY CAD & PB1 domains 345 422 - -
Lele06g0061 1159 Pfam SWIM zinc finger 746 772 IPR007527 GO:0008270
Lele06g0061 1159 MobiDBLite consensus disorder prediction 1137 1159 - -
Lele06g0061 1159 SMART 26again6 751 778 IPR006564 GO:0008270
Lele06g0061 1159 SUPERFAMILY PLP-dependent transferases 57 170 IPR015424 -
Lele06g0061 1159 Pfam PB1 domain 345 425 IPR000270 GO:0005515
Lele06g0061 1159 PANTHER L-CYSTEINE DESULFHYDRASE 193 230 - -
Lele06g0061 1159 CDD PB1_UP2 333 424 - -
Lele06g0061 1159 MobiDBLite consensus disorder prediction 7 21 - -
Lele06g0061 1159 MobiDBLite consensus disorder prediction 1 26 - -
Lele06g0061 1159 MobiDBLite consensus disorder prediction 1137 1151 - -
Lele06g0061 1159 SMART PHD_3 954 1008 IPR001965 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0061 Lele-ChrLele06 398036 405607 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0061 06 398036 405607 Lele06g0061 06 398036 405607 ECH
Lele06g0061 06 398036 405607 Lele07g0258 07 1408570 1409958 hybridization
Lele06g0061 06 398036 405607 Lele08g0063 08 382709 385323 hybridization