Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1324 ATGATCCATCTCACATGTTCTTGCATCGTTAATAGCATTTACTTGTTCATTTTCCATATTTTTGAATCAATCCATTTCTTTTGGGTTTCATTTTTGCAGTTGAGATCACAGAACAAGAACTTGTATACGCTGATGATGAAAAGATCAAGAGCAGTGACAAAACCAGCTTTAATGGCTGATCAGAGTTGTCACCAATCATCTCCTAAACATTATAAGTATGCTAGAGTTATTCAATCCTTTTTTGGTTCGCCAAAATTTAGAGACTTTACCACCAATTGTCTCTCTAGAGCCGAGGCTTTAAGAGTCCCTACTTCAATCTTTGACTCTATGCTATTACCTCCTTTTGGGACATTTTCCCCCAGAATTTCCTCAGAAAAGAAAAGCTCATGGGACAAGATAGATTCCAGAGGCATTGGGCTTGCTCTTATTGATGAGGGAGCTGAAGAAAATTCTGATAAACCCAGCAGCAATGGAAATGTCCTGTTTGGAACACAGCTTAGAGTAAAAATCCCTCCTTTATCACCTTTAACATTTTGTCCGTTTGAATCCCAAACACGTTCGCATGGTGTTGGAATTAAAACCCAAAACTCTCTTGAATCGCCAACTGGGTGTCGAAGTTCAGAAATTTACACACAGAATTCTTCAACTTCAAGGGCAGTGTCCACATGTGTTCTGTCTCTGAGTGAAATGGAGCTTTCTGAGGAGTACACTTGTGTAATATCTCATGGCCCTAATCCAAGAACCACTCATATATTTGATGATTGCGTTGTCAAGAGCCATTGTTCTTTGCCTGCAAGGCCCCATTCTGCTTCAGGGAATTTCCTCAGCTTCTGTTACACTTGCAAGAAGCAGCTTGAGCACACAGAGGACATCTTTATTTACAGAGGTGAGAAAGCTTTCTGCAGTAATGAATGCCGATTATTGGAGGGCAAGAAATTACATGTTATTCTCATGGAGAGTAGCTCCTTGACTAAAGTTTATTTGTTTTTCTCAAGCATTGGTTTCATTATGAAAAGAAAATCCGAATATCACATGAGGCTAAGAAGATCCCCCGCTTTCAATCTTAAGGCCAACAGTTGTTCCACACTAATTATCAAATTACTGTTTCTCGTCCATGACAACACCACCAAATATAAAGCTGAAAAAGAATCTGAAAATAAAACAGGGAACCGAACTCGTAGAAATGATTGA 1191 0.3913 MIHLTCSCIVNSIYLFIFHIFESIHFFWVSFLQLRSQNKNLYTLMMKRSRAVTKPALMADQSCHQSSPKHYKYARVIQSFFGSPKFRDFTTNCLSRAEALRVPTSIFDSMLLPPFGTFSPRISSEKKSSWDKIDSRGIGLALIDEGAEENSDKPSSNGNVLFGTQLRVKIPPLSPLTFCPFESQTRSHGVGIKTQNSLESPTGCRSSEIYTQNSSTSRAVSTCVLSLSEMELSEEYTCVISHGPNPRTTHIFDDCVVKSHCSLPARPHSASGNFLSFCYTCKKQLEHTEDIFIYRGEKAFCSNECRLLEGKKLHVILMESSSLTKVYLFFSSIGFIMKRKSEYHMRLRRSPAFNLKANSCSTLIIKLLFLVHDNTTKYKAEKESENKTGNRTRRND 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1324 396 Pfam zinc-finger of the FCS-type, C2-C2 268 306 IPR007650 -
Lele06g1324 396 ProSiteProfiles Zinc finger FLZ-type profile. 273 317 IPR007650 -
Lele06g1324 396 PANTHER FCS-LIKE ZINC FINGER 8 47 309 IPR044593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1324 Lele-ChrLele06 8483894 8485600 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g1993 13 27313898 27317246 Lele06g1324 06 8483894 8485600 CCT
Lele14g1927 14 25646931 25650590 Lele06g1324 06 8483894 8485600 CCT
Lele15g0412 15 2362336 2365673 Lele06g1324 06 8483894 8485600 CCT
Lele16g0437 16 2344638 2349294 Lele06g1324 06 8483894 8485600 CCT
Lele06g1324 06 8483894 8485600 Lele06g1324 06 8483894 8485600 ECH
Lele06g1324 06 8483894 8485600 Lele07g1529 07 9416401 9418157 hybridization