Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1237 ATGGGTCGAATTGTTAGTGACAAAATGAAGGAAATTTTGCAAACCCCAACTCCTGAATCAAAGATGGTTGACGAAGCTACATCGGAGATCCTGGAGGAACCCAACTGGGGCATGAATTTGAGGATATGTGCAATGATCAATAGTGGAGAGTTTAATGGATCCGAGATTGTGAAGGCCATAAAGAAGAAGATTTCAAGCAAGAATTCAGTGAGCCAGAGGCTCAGTCTTGACTTGCTGGAAGCCTGTGCTATGAATTGTGAGAAAGTGTTTTCTGAGGTGGCATCAGAGAAGGTGCTTGAAGATGTGGTTAGAATGATTGATAATCCGCAAACAGATCATCAGAATAGAAGAAGGGCTTTGCAGTTGATCCGGGCTTGGGGAGAGTCAGAGGATCTTGCCTATCTGCCAGTGTTTCGTCAAACCTATATGAGTCTGAAAGGAAGAAATATGCCTCTGGAGACAGATGCAGTAAATCCACATATGCCATATTCCTCGGAGTCTCATATACATGAAGATTCATTAGATCCTCCTGAAAGTTATCCTATTCCTGATGCTGCATTGTATGAGATGAATGGATCTGCTTTCTCTTCTAATCCCAGAACCCTATCAGTTGAAGAAAAGAAGGAGCATCTTGTCATTGCTCGAAACAGTCTTGAATTACTCTCTACCATACTAAATTCTGGAGCAGAGCCAAAACTGTTAAAGGAAGATGTTACTGTGGACTTGTTGGAAAAGTGCAGGCAGTCATTGTCTGTCATTAAGGTGATCGTGGAAAGCACCGCTGATGATGAGGGGACACTTTTTGAGGCTTTGAACCTTAATGACGAGCTGCAACAGGTAGTTTGTAAGTACGAGGAGTTGGAAGCTGCCCAAGATTCTGGAGCACAACCGCTCCAAGTTAAAGATGCCACAAAGCATGTTGCAGAAGCTGTTCAAAATCCCATCGCACCACCTGAAAGCTTTGAAGGCGATGAATCTGGTGAGTCAGATGCTGCTGAGAGGCTTCAAAGGAAGGCACCGAATAAGTCTAATGCTTCTGAGGTCAATTCTACAGCTGTTGTTGATCGTCCCTGTGAGTTCAACACAATGAATTGCACAAAAGAGAAGGATGCTGAATGA 1119 0.4352 MGRIVSDKMKEILQTPTPESKMVDEATSEILEEPNWGMNLRICAMINSGEFNGSEIVKAIKKKISSKNSVSQRLSLDLLEACAMNCEKVFSEVASEKVLEDVVRMIDNPQTDHQNRRRALQLIRAWGESEDLAYLPVFRQTYMSLKGRNMPLETDAVNPHMPYSSESHIHEDSLDPPESYPIPDAALYEMNGSAFSSNPRTLSVEEKKEHLVIARNSLELLSTILNSGAEPKLLKEDVTVDLLEKCRQSLSVIKVIVESTADDEGTLFEALNLNDELQQVVCKYEELEAAQDSGAQPLQVKDATKHVAEAVQNPIAPPESFEGDESGESDAAERLQRKAPNKSNASEVNSTAVVDRPCEFNTMNCTKEKDAE 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1237 372 Pfam GAT domain 215 288 IPR004152 GO:0035091|GO:0043130
Lele06g1237 372 PANTHER TOM1-LIKE PROTEIN 1 4 345 IPR044836 GO:0035091|GO:0043130|GO:0043328
Lele06g1237 372 SUPERFAMILY GAT-like domain 175 288 - -
Lele06g1237 372 CDD VHS 20 146 - -
Lele06g1237 372 Coils Coil 270 290 - -
Lele06g1237 372 Gene3D - 10 166 IPR008942 -
Lele06g1237 372 MobiDBLite consensus disorder prediction 313 372 - -
Lele06g1237 372 MobiDBLite consensus disorder prediction 339 357 - -
Lele06g1237 372 SMART VHS_2 19 149 IPR002014 GO:0035091|GO:0043130
Lele06g1237 372 Gene3D - 194 291 IPR038425 -
Lele06g1237 372 ProSiteProfiles VHS domain profile. 26 153 IPR002014 GO:0035091|GO:0043130
Lele06g1237 372 Pfam VHS domain 20 128 IPR002014 GO:0035091|GO:0043130
Lele06g1237 372 SUPERFAMILY ENTH/VHS domain 15 149 IPR008942 -
Lele06g1237 372 ProSiteProfiles GAT domain profile. 202 289 IPR004152 GO:0035091|GO:0043130
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1237 Lele-ChrLele06 7855911 7858266 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g1237 06 7855911 7858266 Lele06g1237 06 7855911 7858266 ECH
Lele06g1237 06 7855911 7858266 Lele07g1437 07 8721881 8724324 hybridization
Lele06g1237 06 7855911 7858266 Lele08g1231 08 7802457 7804924 hybridization