Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1214 ATGGCGACTGCAGGTTTCTACCGAAGAGTCCTCCCTTCTCCCCCCGCAATAGAGTTTGCTTCACCCGAAGGAAAGAAAATTTTTGCTGAAGCTCATGCACAAGGAACCATGGAAGGCTTCTTCAAATTAATTTCATACTATCAGACGCAATCTGAACCTGCGTACTGTGGACTGGCCACACTTGCAGTCGTCCTTAATGCACTTGCTATTGACCCTGGTAGAAAATGGAAAGGTCCTTGGAGGTGGTTTGACGATTCCATGTTGGATTGTTGTGAGCCTTTGGCTAAGATTAAAGAGGAAGGTATTACATTTGGAAAAGTTGCGTGTCTGGCTCAATGTAATGGTGCTAAAGTTGAAGCTTTTCGAACAAATGAAACCACGTTAGATAATTTTCGCAAGAATGTAATTTCATGCAGTGCTTCGGAGGATTGTCATGTGATCGTATCATACAACAGAGGAGTGTTTAAACAGACTGGAAGTGGTCATTTTTCACCCCTAGGAGGCTACCACGCGGAAAGAGACATGGTCCTCATTCTGGATGTTGCACGTTTCAAGTATCCTCCTCACTGGATCCCACTTACCCTTCTCTGGGAGGCCATGAATACTGTTGATAAAGCAACTGGGCAATATAGGGGGTACATGGTTATTTCAAGATTTAACAGAGCAACATCAATACTTTATACTGTGAGTTGTAGACATGAAGGTTGGAACAGTGTTGCTAAATACTTAGCTGAAGACGTCCCGCTCCTTTTGAAGTCCGAGGATTTAGAAGACATTCAGAAGCTACTGTCTGTTATATTCAAGTCTCCTCCTACTGAATTAAGAGGGTTTATCACATGGATTGCTGAAGTTCGTAGACAAGAGGATGGAAATCTCACCTTGAGTGAAGAAGAGAGAGGAAGGCTTGCTATCAAGGCAGACATATTGGAACAAATTCGAGCAACTGCACTCTTCGAACATGTAACTAAATGGTTGAATTCTGAAATTTCATGTTGCAGTCCTTATGCAAACCTTGGTGATAAAGAGAAAGACACGCTACGTGCACTTGCTGCAAGCCTTTGTTGCCAAGGGGTGGATCTTTTGACTGGTAATGATAGGCTAGGGTCATCAAGTGGAAAATGCTGCAGTCAAATAAATGTACAACAGTTACATGCCGATTCTGAAAATCCAGTGGCATTGGTTTCTGGAACTGTCAAAACTGGCAGCAGTGAACAAGGAATTGATATTTTGGTCCCTCTGTGTCAAAGTGGGCCAAATAGTCTGTGTATTTCCAGTGAAGGACGCTGCATTGGGTTGCACCCATCCACGGCAGATGTTTTAACAGTGCTTTTATTGGCCTTGCCCTTGCAGACATGGTCAGCCATTAAAGAAGAAAAGCTGCGGGTGGAAGTTACAGACTTTGTAACAACTGAAAACCTCCCTCCCTTGCTTCAGGAAGAGGTTTTGTTCTTGCGAGGGCAACTCCAATTTATCATGACTGATAACGGTGCTTTGCCTTCATCATGA 1506 0.4349 MATAGFYRRVLPSPPAIEFASPEGKKIFAEAHAQGTMEGFFKLISYYQTQSEPAYCGLATLAVVLNALAIDPGRKWKGPWRWFDDSMLDCCEPLAKIKEEGITFGKVACLAQCNGAKVEAFRTNETTLDNFRKNVISCSASEDCHVIVSYNRGVFKQTGSGHFSPLGGYHAERDMVLILDVARFKYPPHWIPLTLLWEAMNTVDKATGQYRGYMVISRFNRATSILYTVSCRHEGWNSVAKYLAEDVPLLLKSEDLEDIQKLLSVIFKSPPTELRGFITWIAEVRRQEDGNLTLSEEERGRLAIKADILEQIRATALFEHVTKWLNSEISCCSPYANLGDKEKDTLRALAASLCCQGVDLLTGNDRLGSSSGKCCSQINVQQLHADSENPVALVSGTVKTGSSEQGIDILVPLCQSGPNSLCISSEGRCIGLHPSTADVLTVLLLALPLQTWSAIKEEKLRVEVTDFVTTENLPPLLQEEVLFLRGQLQFIMTDNGALPSS 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1214 501 Pfam Phytochelatin synthase 6 213 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Lele06g1214 501 SUPERFAMILY Cysteine proteinases 13 217 IPR038765 -
Lele06g1214 501 Gene3D - 16 221 IPR038156 -
Lele06g1214 501 ProSiteProfiles Phytochelatin synthase (PCS) domain profile. 1 221 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Lele06g1214 501 Pfam Domain of unknown function (DUF1984) 231 488 IPR015407 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Lele06g1214 501 PANTHER GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE 4 487 IPR040409 GO:0016756|GO:0046872|GO:0046938
Lele06g1214 501 FunFam Glutathione gamma-glutamylcysteinyltransferase 1 15 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1214 Lele-ChrLele06 7640132 7644089 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g1214 06 7640132 7644089 Lele06g1214 06 7640132 7644089 ECH
Lele06g1214 06 7640132 7644089 Lele07g1413 07 8573017 8576571 hybridization
Lele06g1214 06 7640132 7644089 Lele08g1212 08 7635854 7639768 hybridization