Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1212 ATGGCAACTGCAGGTTTCTACCGAAGAGTCCTCCCTTCTCCCCCCGCAATCGAGTTTGCTTCACCCGAAGGAAAGAAAATTTTTGCTGAAGCTCATGCACAAGGAACCATGGAAGGCTTCTTCAAATTAATTTCATACTATCAAACGCAATCTGAACCTGCGTACTGTGGACTGGCCACACTTGCAGTCGTCCTAAATGCACTTGCTATTGACCCTGGTAGAAAATGGAAAGGTCCTTGGAGGTGGTTTGACGATTCCATGTTGGATTGTTGCGAGCCTTTGGCTAAGATTAAAGAGGAAGGCATTACATTCGGAAAAGTTGCGTGTCTGGCTCAATGTAATGGTGCTAAAGTTGAAGCTTTTCGAACAAATGAAACCACGTTAGATAATTTTCGCAAGAATGTAATTTCATGTAGTGCTTCGGAGGATTGTCATGTGATCGTATCATACAACAGAGGAGCGTTTAAACAGACTGGAAGTGGTCATTTTTCACCACTAGGAGGCTACCACGCAGAAAGAGACATGGTCCTCATTCTGGATGTTGCGCGTTTCAAGTATCCTCCTCACTGGGTCCCACTTACCCTTCTCTGGGAGGCCATGAATACTGTTGATAAAGCAACTGGGCAATATAGGGGGCACATGGTTATTTCAAGATTTAACAGAGCGACATCAATACTTTATACTGTGAGTTGTAGACATGAAGGTTGGAACAGTGTTGCTAAATACTTAGCTGAAGACGTCCCGCACCTTTTGAAGTCCGTGGATTTAGGAGACATTCAGAAGCTACTGTCTGTTATATTCAAGTCTCCTCCTACTGAATTAAGAGGGTTTATCACATGGATTGCTGAAGTTCGTAGACAAGAGGATGGAAATCTCACCTTAAGTGAAGAAGAGAGAGGAAGGCTTGCTATCAAGGCAGACATATTGGAACAAATTCGAGCAACTGCACTCTTCGAACATGTAACTAAATGGTTGAATTATGAAATTTCATGTTGCAGTCCTTATGCAAACCTTGGTGATAAACATAAAGACACGTTACCTGCACTTGCTGCAAGCCTTTGTTGCCAAGGGGTGGATCTTTTGACTGGTAATGATAGGCTAGGGTCGTCAAGTGGAAAATGCTGCAGTCAAATAAATGTACAACAGTTACATGCCGATTGTGAAAATCCGGTGGCATTGGTTTCCGGAACTGTCAAAACTGGCAACAGTGAACAAGGAGTTGATATTTTGGTCCCTCTGTGTCAAAGTGGGCCAAATAGTCTGTGTATGTCCAGTGAAGGACGCTGCATTGGGTTGCACCCATCCACGGCAGATGTTTTAACAGTTCTTTTATTGGCCTTGCCCTTGCAGACATGGTCAGGCATTAAAGAAGAAAAGCTGCGGGTGGAAGTTACAGACCTTGTAACAACTGAAAACCTCCCTCGCTTGCTTCAGGAAGAGGTTTTGTTCTTGCGAGGGCAACTCAAATTTATCATGACTGATATCGGTGCTTTGCCTTCATCATGA 1506 0.4376 MATAGFYRRVLPSPPAIEFASPEGKKIFAEAHAQGTMEGFFKLISYYQTQSEPAYCGLATLAVVLNALAIDPGRKWKGPWRWFDDSMLDCCEPLAKIKEEGITFGKVACLAQCNGAKVEAFRTNETTLDNFRKNVISCSASEDCHVIVSYNRGAFKQTGSGHFSPLGGYHAERDMVLILDVARFKYPPHWVPLTLLWEAMNTVDKATGQYRGHMVISRFNRATSILYTVSCRHEGWNSVAKYLAEDVPHLLKSVDLGDIQKLLSVIFKSPPTELRGFITWIAEVRRQEDGNLTLSEEERGRLAIKADILEQIRATALFEHVTKWLNYEISCCSPYANLGDKHKDTLPALAASLCCQGVDLLTGNDRLGSSSGKCCSQINVQQLHADCENPVALVSGTVKTGNSEQGVDILVPLCQSGPNSLCMSSEGRCIGLHPSTADVLTVLLLALPLQTWSGIKEEKLRVEVTDLVTTENLPRLLQEEVLFLRGQLKFIMTDIGALPSS 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1212 501 PANTHER GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE 4 487 IPR040409 GO:0016756|GO:0046872|GO:0046938
Lele08g1212 501 FunFam Glutathione gamma-glutamylcysteinyltransferase 1 15 220 - -
Lele08g1212 501 Pfam Phytochelatin synthase 6 212 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Lele08g1212 501 ProSiteProfiles Phytochelatin synthase (PCS) domain profile. 1 221 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Lele08g1212 501 SUPERFAMILY Cysteine proteinases 13 217 IPR038765 -
Lele08g1212 501 Gene3D - 16 221 IPR038156 -
Lele08g1212 501 Pfam Domain of unknown function (DUF1984) 231 488 IPR015407 GO:0010038|GO:0016756|GO:0046872|GO:0046938
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1212 Lele-ChrLele08 7635854 7639768 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g1212 08 7635854 7639768 Lele08g1212 08 7635854 7639768 ECH
Lele05g1354 05 8501031 8503663 Lele08g1212 08 7635854 7639768 hybridization
Lele06g1214 06 7640132 7644089 Lele08g1212 08 7635854 7639768 hybridization