Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1413 ATGGCAACTCCAGTGAATAATCGCGAGGTTATACAGAACATTTTTGTTGAAGCTCATGAACAAGGAACCATGGAAGGCTTCAAATTAATTTCATACTATCAAACGCAATCTGAACCTGCGTATTGTGGAATGGCCACGCTTGCAGTCGTCCTTAATGCACTTGCTATTGACCCCGGTAGAAAATGGAAAGAGGATTTAGAAGACATTCAGAAGCTACTGTCTGTTATATTCAAGTCTCCTCCTATTGAATTGAGAGGGTTCATCACATGGATTGCTGAAGTTCGTAGACAAGAGGATGGAAATCTCACCTTGAGCGAAGAAGAGAGAGGAAGGCTTGCTATCCAGGGGGTGGATCTTTTGACTGGTTGTGAGAGGCTATGTTCGTCAGGTGGAAATTGCTGCAGTCAAATAACTGTACAACAGTTACATACCGATTCTGAAAATCCAGTGGCACTGGTTTCTGGAACTGTCAAAACTGGCAACAGTGAACGAGGAGTGGATATTTTAGTCCCTCTGTGTCAAAGGGGGCCAAATAGTTTGTGCATTTCCAATGAAGGACTCTGCATTGGATTGCACCCATCCACTGCAGATGTTTTAACGGTGCTTTTATTGGCCTTGCCCTTGCATACATGGTCAGGCATTAAAGAAGAAAAGCTGCGGGTGGAAGTTGCAACCCTTGTAACAACTGAAAATCTCCCCTCCTTGCTTCAGGAAGAGCATCATCGCTTTCAAGTTTCAACCACTTTGCTTCATTTTGAGATTCTTCAATCTTCATCCATTGGTGGATCAGATATTCACTTCATCCACTTTGGATCTTAA 819 0.431 MATPVNNREVIQNIFVEAHEQGTMEGFKLISYYQTQSEPAYCGMATLAVVLNALAIDPGRKWKEDLEDIQKLLSVIFKSPPIELRGFITWIAEVRRQEDGNLTLSEEERGRLAIQGVDLLTGCERLCSSGGNCCSQITVQQLHTDSENPVALVSGTVKTGNSERGVDILVPLCQRGPNSLCISNEGLCIGLHPSTADVLTVLLLALPLHTWSGIKEEKLRVEVATLVTTENLPSLLQEEHHRFQVSTTLLHFEILQSSSIGGSDIHFIHFGS 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1413 272 PANTHER GLUTATHIONE GAMMA-GLUTAMYLCYSTEINYLTRANSFERASE 64 241 IPR040409 GO:0016756|GO:0046872|GO:0046938
Lele07g1413 272 SUPERFAMILY Cysteine proteinases 17 66 IPR038765 -
Lele07g1413 272 Pfam Phytochelatin synthase 12 65 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Lele07g1413 272 Pfam Domain of unknown function (DUF1984) 114 239 IPR015407 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Lele07g1413 272 Pfam Domain of unknown function (DUF1984) 64 115 IPR015407 GO:0010038|GO:0016756|GO:0046872|GO:0046938
Lele07g1413 272 Gene3D - 7 106 IPR038156 -
Lele07g1413 272 ProSiteProfiles Phytochelatin synthase (PCS) domain profile. 1 244 IPR007719 GO:0010038|GO:0016756|GO:0046872|GO:0046938
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1413 Lele-ChrLele07 8573017 8576571 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g1413 07 8573017 8576571 Lele07g1413 07 8573017 8576571 ECH
Lele05g1354 05 8501031 8503663 Lele07g1413 07 8573017 8576571 hybridization
Lele06g1214 06 7640132 7644089 Lele07g1413 07 8573017 8576571 hybridization