Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0525 ATGGTTAAATTTCTCGTGTTCTTGGTGGGGCTCTGGCTGTTCGGGGGTTGGGCATACCTTTCAGTGCCAAATTACTTCAAGTATAAAGACCCGAGACAGTCAATTGATGCGAGGGTTGAGGATCTCATGAGCCGCATGACTCTTGAGGAGAAGATTGGCCAAATGCTGCAGATTGAACGCAAGGTTGCGTCAGCTGATGTGCTCAAGAAATATTTCATTGGGAGCGTAATGAGTGAGGGTGGGAGTCGTCCTGCTTCGCATGCTTCAGCTGAAACTTGGATTGACATGGTGAATGATTTTCAAAAGGGCGCTTTATCATCTCGACTTGCTATCCCAATGATTTATGGAATCGACTCTGTTCATGGCCATAGCCCTGTTTCCGGAGCAACTGTCTTTCCCCATAATATTGGACTTGGAGCTACCAGGGACCCAGAACTTGTGAAGCGAATTGGAGTTGCCACTGCCCTTGAAGTTCGAGCTACCGGAATTTCGTATGTTTTTGCACCTTGTATAGCAGTCTGCAGAGATCCGAGATGGGGTCGATGTTATGAAAGCTACAGTGAAGATCCTAACTTAGTGCAAGAGATGACTCAGATTATATCAGGATTGCAAGGGGACATTCCTGATAACTCCCCCAGTGGCATCCCTTTTGTTGGTGGAAAAGAGAAGGTGATAGCATGTGCTAAGCACTATGTGGGTGATGGTGGGACAATTAATGGGATTGATGAGAACAACACAATTATAGATAGAGATGGATTGATGAGAATTCACATGCCCGGCTACTTGGTCTCTCTTAGCAAGGGTGTGGCAACAATCATGATCTCATACTCAAGTTGGAATGGAGTAAAAATGCACACTAACCGCGACCTCATTACTGGCTTCCTTAAAAGAACGCTCCATTTCAAGGGTTTTGTTATATCAGATTTTGAGGGCTTAGACAGAATCACCTCCCCACCTCGTGCAAATTACACTTATTCAATCGAAGCCGGAGTTAATGCTGGCATTGACATGTTCATGGTTCCAAAGAACTTCACAGAATTTATAGATGGTGTAACCAGACTGGTCAAAATTAAAGTCATTCCTATGACTCGAATTGATGATGCTGTGAGAAGAATTTTGCGGGTCAAGTTCATAATGGGTCTTTTTGAAAATCCATGGGCTGATTACAACTTAGTCAAATATCTAGGAATTCAGGAGCATAGAGAATTAGCCAGGGAGGCTGTAAGGAAATCGTTGGTCCTACTAAAAAATGGTGACTCACCTGGTGGACCACTTCTACCTCTTTCTAAAAAGGCGTCAAAAATACTTGTAGCTGGAAGTCACGCTCATAACTTAGGCTATCAATGTGGGGGCTGGACCATTGAGTGGCAAGGTGTCAGTGGCAATGATCTTATTAAAGGGACTACTATTCTTACTGCTATAAACAACACAGTTGATCCAGAGACCGAAGTGATCTACAAGGAGAACCCAGACGTAGAATATATCAAGTCTAATGAATTCTCATATGCCATAGTTGTAGTAGGAGAGCATCCTTATGCTGAAATGAATGGTGACAGCAAGAACCTTACAGTCCCCTATCCTGGCCCCGAGACCATTACAAACGTTTGTGGGGTCACAAAATGTGTGGTTGTCATAATCTCTGGTCGCCCTGTTGTTACTGAACCATATATGGCTTCAATGGACGCTCTTGTTGCCGCTTGGCTTCCTGGAAGTGAAGGCCAGGGTGTGGCTGATGTTCTATTTGGTGACTATGGTTTCACAGGAAAGCTTCCACGAACATGGTTCAAAACTGTCGATCAACTACCTATGAATGTTGGAGATCCTCACTATGATCCCCTCTTCCCATTTGGGTTTGGCCTTTCTACCAAACCTACTGAGGAATCTTTGAAATCCTCACTATGA 1902 0.4416 MVKFLVFLVGLWLFGGWAYLSVPNYFKYKDPRQSIDARVEDLMSRMTLEEKIGQMLQIERKVASADVLKKYFIGSVMSEGGSRPASHASAETWIDMVNDFQKGALSSRLAIPMIYGIDSVHGHSPVSGATVFPHNIGLGATRDPELVKRIGVATALEVRATGISYVFAPCIAVCRDPRWGRCYESYSEDPNLVQEMTQIISGLQGDIPDNSPSGIPFVGGKEKVIACAKHYVGDGGTINGIDENNTIIDRDGLMRIHMPGYLVSLSKGVATIMISYSSWNGVKMHTNRDLITGFLKRTLHFKGFVISDFEGLDRITSPPRANYTYSIEAGVNAGIDMFMVPKNFTEFIDGVTRLVKIKVIPMTRIDDAVRRILRVKFIMGLFENPWADYNLVKYLGIQEHRELAREAVRKSLVLLKNGDSPGGPLLPLSKKASKILVAGSHAHNLGYQCGGWTIEWQGVSGNDLIKGTTILTAINNTVDPETEVIYKENPDVEYIKSNEFSYAIVVVGEHPYAEMNGDSKNLTVPYPGPETITNVCGVTKCVVVIISGRPVVTEPYMASMDALVAAWLPGSEGQGVADVLFGDYGFTGKLPRTWFKTVDQLPMNVGDPHYDPLFPFGFGLSTKPTEESLKSSL 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0525 633 FunFam Glycosyl hydrolase family protein 397 623 - -
Lele06g0525 633 Pfam Glycosyl hydrolase family 3 C-terminal domain 412 621 IPR002772 GO:0004553|GO:0005975
Lele06g0525 633 PRINTS Glycosyl hydrolase family 3 signature 132 151 IPR001764 GO:0004553|GO:0005975
Lele06g0525 633 PRINTS Glycosyl hydrolase family 3 signature 294 312 IPR001764 GO:0004553|GO:0005975
Lele06g0525 633 PRINTS Glycosyl hydrolase family 3 signature 178 194 IPR001764 GO:0004553|GO:0005975
Lele06g0525 633 PRINTS Glycosyl hydrolase family 3 signature 108 124 IPR001764 GO:0004553|GO:0005975
Lele06g0525 633 PRINTS Glycosyl hydrolase family 3 signature 224 240 IPR001764 GO:0004553|GO:0005975
Lele06g0525 633 FunFam Beta-D-glucan exohydrolase isoenzyme ExoI 22 396 - -
Lele06g0525 633 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 412 621 IPR036881 GO:0004553|GO:0005975
Lele06g0525 633 Gene3D - 22 396 IPR036962 GO:0004553|GO:0005975
Lele06g0525 633 PANTHER PERIPLASMIC BETA-GLUCOSIDASE-RELATED 25 626 - -
Lele06g0525 633 Gene3D - 397 623 IPR036881 GO:0004553|GO:0005975
Lele06g0525 633 SUPERFAMILY (Trans)glycosidases 25 411 IPR017853 -
Lele06g0525 633 Pfam Glycosyl hydrolase family 3 N terminal domain 47 375 IPR001764 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0525 Lele-ChrLele06 3158382 3161445 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0525 26 624 Glycoside Hydrolase AT5G20950 69.950 0.0 874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0525 06 3158382 3161445 Lele06g0525 06 3158382 3161445 ECH
Lele06g0525 06 3158382 3161445 Lele07g0734 07 4131242 4134241 hybridization
Lele06g0525 06 3158382 3161445 Lele08g0530 08 3207781 3216981 hybridization