Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0734 ATGAGTCGCATGACTCTGGAGGAGAAGATTGGCCAAATGCTGCAGATTGAACGCAAGGTTGCGTCAGCTGATGTGCTCAAGAAATATTCCATTGGGAGTGTAATGAGTGAGGGTGGGAGTCGTCCTGCTCCGCATGCTTCAGCTGAAACTTGGATTGACATGTTGAATGATTTTCAAAAGGGTGCTTTATCAAGTCGGCTTGCTATCCCAATGATTTATGGAATCGACGCTGTTCATGGCCATAGCCCTGTTTCCGGAGCAACGGTCTTTCCCCACAATATTGGACTTGGAGCTACCAGGGACCCAGAACTTGTGAAGCGAATTGGAGCTGCCACTGCCCTTGAAGTTCGAGCTACTGGAATTCCGTACGTTTTTGCACCTTGTATAGCAGTCTGCAGAGATCCGAGATGGGGTCGATGTTATGAAAGCTACAGTGAAGATCCTAACTTAGTACAAGAGATGACTCAGATTATATCAGGATTGCAAGGGGACATTCCTGATAACTCACCCAAGGGCGTCCCTTTTGTTGGTGGAAAAGAGAAGGTTATAGCATGTGCTAAGCACTATGTGGGTGATGGTGGGACAATTTATGGGATTGATGAGAACAACACAATTATAGATAGAGAAGGACTGATAAGAATTCACATGCCCGGCTACTTGGTCTCTATTAGCAAGGGTGTGGCAACAATCATGATCTCATACTCAAGTTGGAATGGAGTAAAAATGCACACTAACCGCAACCTCATTACTGGCTTCCTTAAAAGAACGCTCCATTTCAAGGGTTTTGTTATATCAGATTTTGAGGGCTTAGACAGAATCACCTCCCCACCTCGTGCAAATTACACTTATTCAATCGAAGCCGGAGTTAATGCTGGCATTGACATGTTCATGGTTCCAAAGAACTTCACAGAATTTATAGATGGTGTAATCAGACTGGTTGAAATTAAAGTCATCCCTATGACTCGAATTGACGATGCAATGAGAAGAATTTTGCGGGTCAAGTTCATAATGGGTCTTTTTGAAAATCCATTGGCTGATTACAGCTTAGTCAAATATCTAGGAATTCAGGAGCATAGAGAATTAGCTAGGGAGGCTGTAAGGAAATCATTGGTCCTACTAAAAAATGGCGAGTCACCTGGTGAACCACTTCTACCTCTTCCTAAAAAGGCGTCAAAAATACTTGTAGCTGGAAGTCACGCTCATAATTTAGGCTATCAATGTGGGGGCTGGACCATTGAGTGGCAAGGTGTCAGTGGCAATGATCTTATTAAAGGGACTACTATTCTCACTGCTATAAACAACACAGTTGATCCAGAGACCGAAGTGATCTACAAGGAGAACCCAGATGTAGAATACATCAAGTCTAATGAATTCTCATATGCCATAGTTGTAGTCGGAGAGTATCCTTATGCTGAAATAGATGGCGACAGCAAGAACCTGACAATCCCCTATCCTGGCCCCGAGACTATTACAAAAGTTTGTGGAGCTACAAAATGTGTGGTTGTCTTAATCTCTGGTCGCCCTGTTGTTATTGAACCGTATATGGGCTTAATCGATGCTCTTGTTGCCGCTTGGCTTCCTGGAAGTGAAGGCCAGGGTGTGGCTGATGTTTTATTTGGTGACTATGGTTTCACAGGAAAGCTTCCACGAACATGGTTCAAAACTGTCGATCAACTACCTATGAATGTTGGAGATCTTCACTACGATCCTCTCTTCCCATTTGGGTTTGGCCTTTCTACCAAACCTACTGAGGAATATTTGAAATCCTCACTATGA 1776 0.4358 MSRMTLEEKIGQMLQIERKVASADVLKKYSIGSVMSEGGSRPAPHASAETWIDMLNDFQKGALSSRLAIPMIYGIDAVHGHSPVSGATVFPHNIGLGATRDPELVKRIGAATALEVRATGIPYVFAPCIAVCRDPRWGRCYESYSEDPNLVQEMTQIISGLQGDIPDNSPKGVPFVGGKEKVIACAKHYVGDGGTIYGIDENNTIIDREGLIRIHMPGYLVSISKGVATIMISYSSWNGVKMHTNRNLITGFLKRTLHFKGFVISDFEGLDRITSPPRANYTYSIEAGVNAGIDMFMVPKNFTEFIDGVIRLVEIKVIPMTRIDDAMRRILRVKFIMGLFENPLADYSLVKYLGIQEHRELAREAVRKSLVLLKNGESPGEPLLPLPKKASKILVAGSHAHNLGYQCGGWTIEWQGVSGNDLIKGTTILTAINNTVDPETEVIYKENPDVEYIKSNEFSYAIVVVGEYPYAEIDGDSKNLTIPYPGPETITKVCGATKCVVVLISGRPVVIEPYMGLIDALVAAWLPGSEGQGVADVLFGDYGFTGKLPRTWFKTVDQLPMNVGDLHYDPLFPFGFGLSTKPTEEYLKSSL 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0734 591 PRINTS Glycosyl hydrolase family 3 signature 90 109 IPR001764 GO:0004553|GO:0005975
Lele07g0734 591 PRINTS Glycosyl hydrolase family 3 signature 252 270 IPR001764 GO:0004553|GO:0005975
Lele07g0734 591 PRINTS Glycosyl hydrolase family 3 signature 182 198 IPR001764 GO:0004553|GO:0005975
Lele07g0734 591 PRINTS Glycosyl hydrolase family 3 signature 136 152 IPR001764 GO:0004553|GO:0005975
Lele07g0734 591 PRINTS Glycosyl hydrolase family 3 signature 66 82 IPR001764 GO:0004553|GO:0005975
Lele07g0734 591 PANTHER PERIPLASMIC BETA-GLUCOSIDASE-RELATED 1 584 - -
Lele07g0734 591 Pfam Glycosyl hydrolase family 3 C-terminal domain 370 579 IPR002772 GO:0004553|GO:0005975
Lele07g0734 591 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 370 579 IPR036881 GO:0004553|GO:0005975
Lele07g0734 591 Pfam Glycosyl hydrolase family 3 N terminal domain 5 333 IPR001764 GO:0004553|GO:0005975
Lele07g0734 591 FunFam Glycosyl hydrolase family protein 355 581 - -
Lele07g0734 591 Gene3D - 1 354 IPR036962 GO:0004553|GO:0005975
Lele07g0734 591 Gene3D - 355 581 IPR036881 GO:0004553|GO:0005975
Lele07g0734 591 SUPERFAMILY (Trans)glycosidases 1 369 IPR017853 -
Lele07g0734 591 FunFam Beta-D-glucan exohydrolase isoenzyme ExoI 1 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0734 Lele-ChrLele07 4131242 4134241 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g0734 1 582 Glycoside Hydrolase AT5G20950 71.478 0.0 860
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g0734 07 4131242 4134241 Lele07g0734 07 4131242 4134241 ECH
Lele05g0694 05 4084959 4096551 Lele07g0734 07 4131242 4134241 hybridization
Lele06g0525 06 3158382 3161445 Lele07g0734 07 4131242 4134241 hybridization