Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0530 ATGGGCACAGTTCGTAAACTAATAGTGGAGGTTGTGGACGCTCGAGATCTTCTCCCGAAAGATGGGCACGGCACTTCCAGTCCTTATGTGGTGGTGGACTTCTACGGCCAACGGAAGCGAATCCCGACGGTGGTTCGTGACTTGAGCCCGGCGTGGAATGAAACGCTGTCGTTTAATGTGGGTAAGCCTTCTGACATTCTTGGTGATATGCTTGAACTCGATGTTCTCCATGACAAGAATTACGGTCCCACCCGACGCAACAATTTCCTGGGTCGAATTCGGCTCAGCTCTTCTCAGTTTGTGCGTAAAGGCGAAGAAGCCTTGATTTACTACAAGTTGGAGAAGAAAAGCTTTTTCAACTGGGTTCGAGGTGAAATTGGGTTGAAAATCTATTTCGTGGACGAGGAAATTCCACCGCCACCACCGCCGGCACCAACAGCATCACCGCCAAAGGAAGTGAAGCCCGAGGCAGAGGCAGCGGCAGCAACACCAGCACCAGCACCAGAGGAAGCGAAGTCCGATGCAACACCAGCACCAGAGGAAGAGGAGGCAAACCCATCATCTGAAGCAGCAGCAGCAGCAGCAGCCGAGCCAGGTAAGGTCGAAGAATGTGAGGAGGCGGCTGCTCCACCTACGGAACCACCACCGGAAAGCGACAAGACCAGTGAAGAGCCAGCACCTGCTGAAGCTCCCACACCTGAAAATGCAGCTCCTGATGCTGAAAAGCCGGTTGAGCCTCAGCAGCTGCAACCGCCGACAGTAGAATGTGGAGATCAGGTGAAATCTTCACCACTTGAAACATCTAGAACGATGTCTGAAGTAAGGTTCAATGGGCTGAACGTTCCACAAGGACCACAACCAATTCGACGGGCAGCATCCACGGCGAGCTTCACGTCCGACGTGTCGGATACCATGTCCATGGAACGATGCTCGTTTGATCTAGTTGAGAAAATGCACTACCTCTTCGTTCGCCTCGTGAAAGCACGATACTTGCCGCCGAACTGTTACCCCTTCGTGAACATTGCAGTTTCCGGCCATCAAGTCACATCCAAGCCCGTGCGTAAAACCACCTTATTCGAATGGGACCAAACGTTTGCTTTCGGCCGCGACTCCCCCGAATCTGCTTCCCTCCTTGAAGTCTCCGTGTGGGACCCCCCCGCTTCTGGTCCCACCGCATTAGACGACGACTCTCGCAGTTTTCTGGGTGGGCTTTGCTTTGAGGTGTCGGAGATTCCTCTCAGGGACCCACCAGACAGCCCCCTGGCCCCACAGTGGTACAGACTGGAAGGTGGAGGGGCCCGCTACGGGGACCTCATGCTTGCCACGTGGGTTGGCACTCAAGCTGACGAGGCATTCCCAGAAGCGTGGAAAACGGACACGGCTGGGAGTGTTCACTCTCGCGCCAAGATCTACCAATCCCCGAAGCTTTGGTACCTAAGGGCCACAGTGCTTGAAGCTCAGGACATTCTACCGTTAACGGTGTTAAAAGAGGCTTCCTTCCAGGTCAGAGTTCAACTTGGATTTCAAGTGCTAAAGTCAAAAATCTCCGTCACTCGTAACAGCATTGCTTCATGGAACAACGATTTGATCTTCGTCGCTGCTGAGCCATTCAGTGACCAGCTCATTTTCACTCTTGAAAATCGACAACCTAAAGGATCGATAACAATGGGCGTCGTGAGAATACCTCTTACTAACATTGAACGAAGGGTAGATGACCGTAACGTAGCATCCCGTTGGTTCCCTTTTGAGGATGTTAACAACGACAATAGAGTTTACAATGGCAGGATCCACCTGCGTTTGTGCTTCGATGGCGGATATCACGTGATGGATGAATCTTCTCACGTGTGCAGCGATTTCCGTCCCACGGCAAGGCAACTTTGGAAGCCACCGGTTGGCACCGTTGAACTAGGAATCATCGGATGCAAGAACCTGATACCGGTGAAAACAGTGAACGGCAAAAGCTCCACAGATGCGTATTGTGTGGCCAAATACGGCAACAAATGGGTACGTACCCGAACCGTATCCGATAGCTTGGATCCCAAGTGGAACGAGCAGTACACATGGAAGGTGTTTGATCCCTGCACGGTTTTGACCATCGGAATCTTTGATAGCTTCGGAGTATACGATGTGGATGGTGAGGAAGAAGCCATGAGACCCGATTTTCGCATCGGCAAGGTACGAGTTCGTATATCCACGTTGCAAACGGGTCGGGTGTACCGAAACACGTACCCGTTACTTGTGTTGACCAACGCGGGAACGAAGAAGATGGGTGAAATAGAGATTGCCATCCGATTCATTCGAACCACTCAAACGTTGGATTTCCTTCAAGTGTACTCACAGCCAATGCTGCCGTTGATGCACCACATCAAGCCCTTGGGACTGGCGCAACAAGAAATGTTGAGAAACACAGCTGTGAAGATCGTGGCGGGACACTTGTCGAGATCAGAGCCACCGTTGAGAAAAGAGGTAGTACTTTACATGCTAGACGCGGACTCTCACAACTTCAGCATGCGTAAGGTACGTGCCAATTGGTACAGAATCATCAACGTGGTCGCGGGGTTCATTGACATCCTACGGTGGATAGAAGATACACGTGGGTGGAAGAATCCAATGGCCACCATTCTGGTACATGCATTGCTGGTGATGCTGGTGTGGTTTCCCGATTTGATAATTCCGACGCTGGCATTTTACGTGTTCGTGATAGGCGCATGGAACTACAGGTTCAGATCGAGGGACCCATTGCCACACTTCGATCAGAAAATATCACTGGCGGAGGTGGTGGATCGGGGGGAGCTGGATGAGGAATTCGATACGGTGCCGAGCTGCAGAGCGGGAGAGATGATCCGGGCGAGGTATGATAAGCTGAGGACGTTGGGGGTACGTGTGCAGAAGGTATTGGGGGATATAGCGGCGCAGGGGGAGAGAGTGCAGGCGTTGGTGACGTGGAGAGATCCACGTGGGACGGGCATATTCGTAGGGATGTGTTTGGTCGTGGCGTTAGGGCTGTACTTGGTGCCGCCCAAAATGGTGGCGATGGCTTTCGGGTTCTACTATTTGAGGCATCCCATATTTCGGGATAGGACGCCTTCACCAGCTCTCAACTTCTTCAGAAGGCTTCCTTCATTGTCAGATCGAATCATGTCCCTACCCTCTCCCTTACCATGCTTATATATTCTGCCTCCCACCATTTTCTTCCCATCGCGGGCTCTTCCATCTCTGGATCTGAAGACACAAAATAGTCACTTCTTGAAAAATGTTGACCTTCCATTTCAAATCTCAATCTCGATTGAATTCTACTGTTGCTCTGCAACTGATTTCAGCCTCCAGAGATGGAAGTTGAAGGAAATGGTTAAAATTCTCGTGTTCTTGGCGGGGCTCTGGCTGTTCGGGGGTTGGGCATACCTCTCAGTGCCAAATTACTTGAAGTATAAAGACCCGAGACGGTCAATTGATGCGAGGGTTGAGGATCTCATGAGCCGCATGACTCTTGAGGAGAAGATTGGCCAAATGCTGCAGATTGAACGCAAGGTTGCGTCAGCTGATGTTCTTAAGAAATATTTCATTGGGAGTGTAATGAGTGAGGGTGGGAGTCGTCCTGCTCCGCATGCTTCAGCCGAAACTTGGATGGACATGGTGAATGATTTTCAAAAGGGCGCTTTATCATCTCGACTTGCTATCCCAATGATTTATGGAATCGACTCTGTTCATGGCCATAGCCCTGTTTCCGGAGCAACTGTCTTTCCCCACAATATTGGACTTGGAGCTACCAGGGACCCAGAACTTGTGAAGCGAATTGGAGCTGCCACTGCCCTTGAAGTTCGAGCTACTGGAATTCCGTATGTTTTTGCACCTTGTATAGCAGTCTGCAGAGATCCGAGATGGGGTCGATGTTATGAAAGCTACAGTGAAGATCCTAACTTAGTGCAAGAGATGACTCAGATTATATCAGGATTGCAAGGGGACATTCCTGAGAACTCCCCCAAGGGCATCCCTTTTGTTGGTGGAAAAGAGAAGGTGATAGCATGTGCTAAGCACTATGTGGGTGATGGTGGGACAATATATGGGATTGATGAGAACAACACAATTATAGATAGAGATGGATTGATGAGAATTCACATGCCCGGCTACTTGGTCTCTATTAGCAAGGGTGTGGCAACAATCATGATCTCATACTCAAGTTGGAATGGAGTAAAAATGCACACTAACCGCAACCTCATTACTGGCTTCCTTAAAAGAACGCTCCATTTCAAGGGTTTTGTTATATCAGATTTTGAGGGCTTAGACAGAATCACCTCCCCACCTCGTGCAAATTACACTTATTCAATCGAAGCCGGAGTTAATGCTGGCATTGACATGTTCATGGTTCCAAAGAACTTCACAGAATTTATAGATGGTGTAACCAGACTGGTCAAAATTAAAGTCATTCCTATGACTCGAATTGACGATGCTGTGAGAAGAATTTTGCGGGTCAAGTTCATAATGGGTCTTTTTGAAAATCCATTGGCTGATTACAGCTTAGTCAAATATCTAGGAGTTCAGGAGCATAGAGAATTAGCCAGGGAGGCTGTAAGGAAATCGTTGGTCCTACTAAAAAATGGTGACTCACCTGGTGGACCAATTCTACCTCTTCCTAAAAATGTGTCAAAAATACTTGTAGCTGGAAGTCACGCTCATAACTTAGGCTATCAATGTGGGGGCTGGACCATTGAGTGGCAAGGTGTCAGTGGCAATGATCTTATTAAAGGGACTACTATTCTCACTGCTATAAACAACACAGTTGATCCAGAGACCGAAGTGATCTACAAGGGGAACCCAGATGTAGAATATATCAAGTCTAATGAATTCTCATATGCCATAGTTGTAGTAGGAGAGCATCCTTATGCTGAAATGGATGGGGACAGCAAGAACCTTACAGTCCCCTATCCTGGCCCCGAGACCATTACAAACGTTTGTGGGGTTACAAAATGTGTGGTTGTCATAATCTCTGGTCGCCCTGTTGTTATTGAACCATATATGGCTTCAATGGATGCTCTTGTTGCCGCTTGGCTTCCTGGAAGTGAAGGCCAGGGTGTGGCTGATGTTCTATTTGGTGACTATGGTTTCACAGGAAAACTTCCACGAACATGGTTCAAAACTGTCGATCAACTACCTATGAATGTTGGAGATCCTCGCTATGATCCCCTCTTCCCATTTGGGTTTGGCCTTTCTACCAAACCTACTGAGGAATCTTTGAAATCCTCAATATGA 5247 0.4896 MGTVRKLIVEVVDARDLLPKDGHGTSSPYVVVDFYGQRKRIPTVVRDLSPAWNETLSFNVGKPSDILGDMLELDVLHDKNYGPTRRNNFLGRIRLSSSQFVRKGEEALIYYKLEKKSFFNWVRGEIGLKIYFVDEEIPPPPPPAPTASPPKEVKPEAEAAAATPAPAPEEAKSDATPAPEEEEANPSSEAAAAAAAEPGKVEECEEAAAPPTEPPPESDKTSEEPAPAEAPTPENAAPDAEKPVEPQQLQPPTVECGDQVKSSPLETSRTMSEVRFNGLNVPQGPQPIRRAASTASFTSDVSDTMSMERCSFDLVEKMHYLFVRLVKARYLPPNCYPFVNIAVSGHQVTSKPVRKTTLFEWDQTFAFGRDSPESASLLEVSVWDPPASGPTALDDDSRSFLGGLCFEVSEIPLRDPPDSPLAPQWYRLEGGGARYGDLMLATWVGTQADEAFPEAWKTDTAGSVHSRAKIYQSPKLWYLRATVLEAQDILPLTVLKEASFQVRVQLGFQVLKSKISVTRNSIASWNNDLIFVAAEPFSDQLIFTLENRQPKGSITMGVVRIPLTNIERRVDDRNVASRWFPFEDVNNDNRVYNGRIHLRLCFDGGYHVMDESSHVCSDFRPTARQLWKPPVGTVELGIIGCKNLIPVKTVNGKSSTDAYCVAKYGNKWVRTRTVSDSLDPKWNEQYTWKVFDPCTVLTIGIFDSFGVYDVDGEEEAMRPDFRIGKVRVRISTLQTGRVYRNTYPLLVLTNAGTKKMGEIEIAIRFIRTTQTLDFLQVYSQPMLPLMHHIKPLGLAQQEMLRNTAVKIVAGHLSRSEPPLRKEVVLYMLDADSHNFSMRKVRANWYRIINVVAGFIDILRWIEDTRGWKNPMATILVHALLVMLVWFPDLIIPTLAFYVFVIGAWNYRFRSRDPLPHFDQKISLAEVVDRGELDEEFDTVPSCRAGEMIRARYDKLRTLGVRVQKVLGDIAAQGERVQALVTWRDPRGTGIFVGMCLVVALGLYLVPPKMVAMAFGFYYLRHPIFRDRTPSPALNFFRRLPSLSDRIMSLPSPLPCLYILPPTIFFPSRALPSLDLKTQNSHFLKNVDLPFQISISIEFYCCSATDFSLQRWKLKEMVKILVFLAGLWLFGGWAYLSVPNYLKYKDPRRSIDARVEDLMSRMTLEEKIGQMLQIERKVASADVLKKYFIGSVMSEGGSRPAPHASAETWMDMVNDFQKGALSSRLAIPMIYGIDSVHGHSPVSGATVFPHNIGLGATRDPELVKRIGAATALEVRATGIPYVFAPCIAVCRDPRWGRCYESYSEDPNLVQEMTQIISGLQGDIPENSPKGIPFVGGKEKVIACAKHYVGDGGTIYGIDENNTIIDRDGLMRIHMPGYLVSISKGVATIMISYSSWNGVKMHTNRNLITGFLKRTLHFKGFVISDFEGLDRITSPPRANYTYSIEAGVNAGIDMFMVPKNFTEFIDGVTRLVKIKVIPMTRIDDAVRRILRVKFIMGLFENPLADYSLVKYLGVQEHRELAREAVRKSLVLLKNGDSPGGPILPLPKNVSKILVAGSHAHNLGYQCGGWTIEWQGVSGNDLIKGTTILTAINNTVDPETEVIYKGNPDVEYIKSNEFSYAIVVVGEHPYAEMDGDSKNLTVPYPGPETITNVCGVTKCVVVIISGRPVVIEPYMASMDALVAAWLPGSEGQGVADVLFGDYGFTGKLPRTWFKTVDQLPMNVGDPRYDPLFPFGFGLSTKPTEESLKSSI 1748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0530 1748 PRINTS Glycosyl hydrolase family 3 signature 1339 1355 IPR001764 GO:0004553|GO:0005975
Lele08g0530 1748 PRINTS Glycosyl hydrolase family 3 signature 1247 1266 IPR001764 GO:0004553|GO:0005975
Lele08g0530 1748 PRINTS Glycosyl hydrolase family 3 signature 1409 1427 IPR001764 GO:0004553|GO:0005975
Lele08g0530 1748 PRINTS Glycosyl hydrolase family 3 signature 1223 1239 IPR001764 GO:0004553|GO:0005975
Lele08g0530 1748 PRINTS Glycosyl hydrolase family 3 signature 1293 1309 IPR001764 GO:0004553|GO:0005975
Lele08g0530 1748 ProSiteProfiles C2 domain profile. 615 743 IPR000008 -
Lele08g0530 1748 Gene3D C2 domain 3 161 IPR035892 -
Lele08g0530 1748 Pfam Plant phosphoribosyltransferase C-terminal 891 1047 IPR013583 -
Lele08g0530 1748 ProSiteProfiles C2 domain profile. 460 580 IPR000008 -
Lele08g0530 1748 SUPERFAMILY (Trans)glycosidases 1141 1526 IPR017853 -
Lele08g0530 1748 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 1527 1736 IPR036881 GO:0004553|GO:0005975
Lele08g0530 1748 CDD C2D_MCTP_PRT_plant 634 762 - -
Lele08g0530 1748 FunFam Beta-D-glucan exohydrolase isoenzyme ExoI 1137 1511 - -
Lele08g0530 1748 Pfam Glycosyl hydrolase family 3 C-terminal domain 1527 1736 IPR002772 GO:0004553|GO:0005975
Lele08g0530 1748 FunFam C2 domain-containing protein 615 768 - -
Lele08g0530 1748 Gene3D C2 domain 616 768 IPR035892 -
Lele08g0530 1748 Gene3D C2 domain 461 603 IPR035892 -
Lele08g0530 1748 CDD C2B_MCTP_PRT_plant 320 446 - -
Lele08g0530 1748 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 146 IPR035892 -
Lele08g0530 1748 CDD C2C_MCTP_PRT_plant 478 621 - -
Lele08g0530 1748 Gene3D - 1137 1511 IPR036962 GO:0004553|GO:0005975
Lele08g0530 1748 Gene3D - 1512 1738 IPR036881 GO:0004553|GO:0005975
Lele08g0530 1748 Pfam Glycosyl hydrolase family 3 N terminal domain 1162 1490 IPR001764 GO:0004553|GO:0005975
Lele08g0530 1748 MobiDBLite consensus disorder prediction 252 268 - -
Lele08g0530 1748 PANTHER PHOSPHORIBOSYLANTHRANILATE TRANSFERASE ISOFORM 1 6 1047 - -
Lele08g0530 1748 Pfam C2 domain 632 745 IPR000008 -
Lele08g0530 1748 Pfam C2 domain 477 581 IPR000008 -
Lele08g0530 1748 Pfam C2 domain 6 103 IPR000008 -
Lele08g0530 1748 Pfam C2 domain 320 416 IPR000008 -
Lele08g0530 1748 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 320 459 IPR035892 -
Lele08g0530 1748 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 632 786 IPR035892 -
Lele08g0530 1748 CDD C2A_MCTP_PRT_plant 6 134 - -
Lele08g0530 1748 ProSiteProfiles C2 domain profile. 302 426 IPR000008 -
Lele08g0530 1748 MobiDBLite consensus disorder prediction 140 268 - -
Lele08g0530 1748 SMART C2_3c 633 742 IPR000008 -
Lele08g0530 1748 SMART C2_3c 478 575 IPR000008 -
Lele08g0530 1748 SMART C2_3c 6 109 IPR000008 -
Lele08g0530 1748 SMART C2_3c 320 420 IPR000008 -
Lele08g0530 1748 Gene3D C2 domain 310 441 IPR035892 -
Lele08g0530 1748 FunFam Glycosyl hydrolase family protein 1512 1738 - -
Lele08g0530 1748 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 477 623 IPR035892 -
Lele08g0530 1748 ProSiteProfiles C2 domain profile. 1 110 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0530 Lele-ChrLele08 3207781 3216981 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0530 1 1047 Lipid Metabolism Gene Families AT5G17980 64.444 0.0 1402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g0530 08 3207781 3216981 Lele08g0530 08 3207781 3216981 ECH
Lele05g0694 05 4084959 4096551 Lele08g0530 08 3207781 3216981 hybridization
Lele06g0525 06 3158382 3161445 Lele08g0530 08 3207781 3216981 hybridization