Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0022 ATGTCGAGCTTCAGCATTTGGTTTGCTCTGTGGGCACTAGCTCTTGTATTTGTCTCATCGGTTTCGGCTGACGACGTGCTCGTGCTGACGGAGGCCAACTTTGATCAAGAAGTTGGCCAAGATCGCGGCGCTCTTGTCGAGTTCTACGCTCCCTGGTGTGGACACTGTAAAAAGCTCGCACCAGAGTATGAAAAACTGGGAGCAAGTTTTCAAAAAGCCAAATCCATTTTGATTGGGAAGGTAGATTGTGATGATCAAAAAGGCATTTGCAGCAAATATGGTGTCTCTGGTTATCCCACAATTCAATGGTTTCCTAAGGGATCTTTGGAACCAAAGAAGTATGAAGGTGCACGTACTGCAGAAGCCCTCGCTGAGTTTGTGAACAAGGAAGGAGCTACCAATGTGAAGCTAGCTTCTGTTCCATCCAGTGTGGTGGTTCTCACTCCAAATAACTTTGATCAGGTTGTATTGGATGAAACAAAAGACGTTCTGGTTGAGTTCTATGCTCCATGGTGTGGTCATTGTAAAGCCCTTGCCTCTACTTATGAGAAAGTTGCTACAGCATTCAAACTGGAGGAAGATGTTGTAATAGCAAACATTGACGCTGACCAACACAAAGATATTGCTGAGAAGTATGGTGTAAGTGGCTATCCTACTCTCAAATTTTTCCCAAGGAGCAATAAAGCTGGTGAAGATTATGATGGTGGCCGAGACTTGGATGACTTTGTAACTTTTATCAATGAGAAAAGTGGTACCAGCCGTGATGGGAAAGGACAGCTTACCTCTAAAGCTGGTTTAGTACCAACTCTGGATGGCTTGATGAAGGATTTTGTGAGTGCTTCTAGTGATGAAAAGAAAGAGGTTTATTCTCGGCTCGAGGAGGAAGCTAAGAAACTTGAGGGCTCTTCTGCAAGATATGGCAATATCTACTTAAAAGTTGCTAAAAAGTGCATTGAAAAAGGAGCTGACTATGCATCAAAGGAGATTCAAAGGCTTGAGCGCATACTTGACAAGTCAGTCAGCACTGCAAAGGCAGATGAGCTCACTCTCAAGAAGAACGTCTTGTCTACGTTTGTTGCCTGA 1083 0.4395 MSSFSIWFALWALALVFVSSVSADDVLVLTEANFDQEVGQDRGALVEFYAPWCGHCKKLAPEYEKLGASFQKAKSILIGKVDCDDQKGICSKYGVSGYPTIQWFPKGSLEPKKYEGARTAEALAEFVNKEGATNVKLASVPSSVVVLTPNNFDQVVLDETKDVLVEFYAPWCGHCKALASTYEKVATAFKLEEDVVIANIDADQHKDIAEKYGVSGYPTLKFFPRSNKAGEDYDGGRDLDDFVTFINEKSGTSRDGKGQLTSKAGLVPTLDGLMKDFVSASSDEKKEVYSRLEEEAKKLEGSSARYGNIYLKVAKKCIEKGADYASKEIQRLERILDKSVSTAKADELTLKKNVLSTFVA 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0022 360 FunFam Protein disulfide-isomerase A6 homolog 137 256 - -
Lele06g0022 360 ProSiteProfiles Thioredoxin domain profile. 126 251 IPR013766 -
Lele06g0022 360 SUPERFAMILY Thioredoxin-like 17 129 IPR036249 -
Lele06g0022 360 Gene3D Glutaredoxin 19 136 - -
Lele06g0022 360 FunFam Protein disulfide-isomerase A6 homolog 19 136 - -
Lele06g0022 360 Coils Coil 282 302 - -
Lele06g0022 360 Pfam Endoplasmic reticulum protein ERp29, C-terminal domain 265 358 IPR011679 GO:0005783
Lele06g0022 360 Pfam Thioredoxin 26 128 IPR013766 -
Lele06g0022 360 Pfam Thioredoxin 144 247 IPR013766 -
Lele06g0022 360 CDD ERp29c 267 358 IPR011679 GO:0005783
Lele06g0022 360 ProSitePatterns Thioredoxin family active site. 45 63 IPR017937 -
Lele06g0022 360 ProSiteProfiles Thioredoxin domain profile. 8 125 IPR013766 -
Lele06g0022 360 SUPERFAMILY Thioredoxin-like 141 252 IPR036249 -
Lele06g0022 360 ProSitePatterns Thioredoxin family active site. 164 182 IPR017937 -
Lele06g0022 360 SUPERFAMILY ERP29 C domain-like 264 359 IPR036356 -
Lele06g0022 360 Gene3D Glutaredoxin 137 263 - -
Lele06g0022 360 TIGRFAM pdi_dom: protein disulfide-isomerase domain 147 249 IPR005788 GO:0003756
Lele06g0022 360 TIGRFAM pdi_dom: protein disulfide-isomerase domain 29 130 IPR005788 GO:0003756
Lele06g0022 360 PANTHER PROTEIN DISULFIDE-ISOMERASE C17H9.14C-RELATED 22 345 - -
Lele06g0022 360 CDD PDI_a_ERp38 25 127 - -
Lele06g0022 360 CDD PDI_a_ERp38 143 246 - -
Lele06g0022 360 PRINTS Thioredoxin family signature 52 61 - -
Lele06g0022 360 PRINTS Thioredoxin family signature 213 224 - -
Lele06g0022 360 PRINTS Thioredoxin family signature 44 52 - -
Lele06g0022 360 Gene3D - 264 360 IPR036356 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0022 Lele-ChrLele06 155904 158987 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0022 06 155904 158987 Lele06g0022 06 155904 158987 ECH
Lele06g0022 06 155904 158987 Lele07g0217 07 1190979 1197768 hybridization
Lele06g0022 06 155904 158987 Lele08g0024 08 150706 153803 hybridization