Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0217 ATGAAGAACAGATCACACTTGCGTTCATCGAAAAGGGGGCAGGTAACGATGTCGAGCTTCAGCATTTTGTTTGCTCTGGGGGCACTAGCTCTTTTATTTGTCTCATCGGTTTCGGCAGACGACGTGGTCGTGCTGACGGAAGCCAACTTTGATCAAGAAGTTGGCCAAGATAGCGGTTCTCTTGTCGAGTTCTACGCTCCCTGGTGTGGACACTGTAAAAGGCTCGCACCAGAGTATGAAAAACTGGGAGCAAGTTTTAAAAAGGCCAAATCCATTTTGATTGGGAAGGTAGATTGTGATGATCAAAAAAGCATTTGCAGCAAATATGGTGTCTCTGGTTATCCCACAATTCAATGGTTTCCTAAGGGATCTTTGGAACCAAAGAAGTATGAAGGAGCACGTACTGCAGAAGCCCTCGCTGAGTTTGTAAACAAAGAAGGAGGTACCAATGTGAAGATAGCTTCTGTTCCATCCAGTGTGGTGGTTCTCACTCCAGATAACTTTGATCAGGTTGTATTGGATGAAACAAAAGACGTTCTGGTTGAGTTCTATGCTCCATGGTGTGGTCATTGTAAAGGCCTTGCCCCTACTTATGAGAAAGTTGCTACAGCATTCAAACTGGAGGAAGATGTTGTAATAGCAAATATTGACGCTGACCAACACAAAGATATTGCTGAGAAGTATGGTGTAAGTGGCTATCCTACTCTCAGATTTTTCCCAAGGAGCAATAAAGCTGGTGAAGATTATGATGGCGGCCGAGATTTGGATGACTTTGTAACTTTTATCAATGAGAAAAGTGGTACCAGCCGTGATGGGGAAGGACAGCTTACCTCTAAAGCTGGTTTAGTACCAACTCTGGATGGCTTGGTGAAGGATTTTGTGAGTGCTTCTAGTGATGAAAAGAAAGAGGTTTATTCTCAGCTCGAGGAGGAAGCTAAGAAACTTGAGGGTTCTGCTGCAAGATATGGCAATATCTACTTAAAAGCTGCTAAAAACTGCATTGAAAAAGGAGCTGACTATCCATCAAAGGAGATTCAAAGACTTGAGCGCATACTTGACAAGTCAGTCAGCCCTGCAAAGGCAGATGAGCTCACTCTCAAGAAGAACGTCTTGTCTACAAAGGAGGAGGATGGGAAGGTAAGGACTACACCTCAATATTGGTCCATGGTTTCTCAGCATCTACAAGGATACATATTGGGAAATGAAGAAATATCATTTGCCCCTTTCAACCCAGAAAGAGCAGACTCAGAGATTAGTACGTATCTGGGCTGCCTGATCTAA 1281 0.4364 MKNRSHLRSSKRGQVTMSSFSILFALGALALLFVSSVSADDVVVLTEANFDQEVGQDSGSLVEFYAPWCGHCKRLAPEYEKLGASFKKAKSILIGKVDCDDQKSICSKYGVSGYPTIQWFPKGSLEPKKYEGARTAEALAEFVNKEGGTNVKIASVPSSVVVLTPDNFDQVVLDETKDVLVEFYAPWCGHCKGLAPTYEKVATAFKLEEDVVIANIDADQHKDIAEKYGVSGYPTLRFFPRSNKAGEDYDGGRDLDDFVTFINEKSGTSRDGEGQLTSKAGLVPTLDGLVKDFVSASSDEKKEVYSQLEEEAKKLEGSAARYGNIYLKAAKNCIEKGADYPSKEIQRLERILDKSVSPAKADELTLKKNVLSTKEEDGKVRTTPQYWSMVSQHLQGYILGNEEISFAPFNPERADSEISTYLGCLI 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0217 426 ProSitePatterns Thioredoxin family active site. 61 79 IPR017937 -
Lele07g0217 426 Gene3D - 280 383 IPR036356 -
Lele07g0217 426 Gene3D Glutaredoxin 153 279 - -
Lele07g0217 426 ProSitePatterns Thioredoxin family active site. 180 198 IPR017937 -
Lele07g0217 426 Gene3D Glutaredoxin 35 152 - -
Lele07g0217 426 TIGRFAM pdi_dom: protein disulfide-isomerase domain 163 265 IPR005788 GO:0003756
Lele07g0217 426 TIGRFAM pdi_dom: protein disulfide-isomerase domain 45 146 IPR005788 GO:0003756
Lele07g0217 426 SUPERFAMILY ERP29 C domain-like 280 373 IPR036356 -
Lele07g0217 426 SUPERFAMILY Thioredoxin-like 157 268 IPR036249 -
Lele07g0217 426 SUPERFAMILY Thioredoxin-like 33 145 IPR036249 -
Lele07g0217 426 Pfam Thioredoxin 42 144 IPR013766 -
Lele07g0217 426 Pfam Thioredoxin 160 263 IPR013766 -
Lele07g0217 426 PANTHER PROTEIN DISULFIDE-ISOMERASE C17H9.14C-RELATED 37 362 - -
Lele07g0217 426 FunFam Protein disulfide-isomerase A6 homolog 35 153 - -
Lele07g0217 426 ProSiteProfiles Thioredoxin domain profile. 24 148 IPR013766 -
Lele07g0217 426 Pfam Endoplasmic reticulum protein ERp29, C-terminal domain 281 372 IPR011679 GO:0005783
Lele07g0217 426 PRINTS Thioredoxin family signature 187 196 - -
Lele07g0217 426 PRINTS Thioredoxin family signature 179 187 - -
Lele07g0217 426 PRINTS Thioredoxin family signature 229 240 - -
Lele07g0217 426 Coils Coil 298 325 - -
Lele07g0217 426 FunFam Protein disulfide-isomerase A6 homolog 154 272 - -
Lele07g0217 426 CDD PDI_a_ERp38 159 262 - -
Lele07g0217 426 CDD PDI_a_ERp38 41 143 - -
Lele07g0217 426 CDD ERp29c 283 373 IPR011679 GO:0005783
Lele07g0217 426 ProSiteProfiles Thioredoxin domain profile. 152 267 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0217 Lele-ChrLele07 1190979 1197768 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g0217 07 1190979 1197768 Lele07g0217 07 1190979 1197768 ECH
Lele06g0022 06 155904 158987 Lele07g0217 07 1190979 1197768 hybridization