Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0024 ATGAAAAAAAAAGAGTATTGGAAAGGCATCAAGAACAGATCAGACTTGCGTTCATCGAACAGGGAGCAGGTAACCATGTCGAGCTTCAGCATTTGGTTTGCTCTCGGGGCCCTATCTCTTGTATTTGTCTCATTGGTTTCGGCTGACGACGTGGTCGTGCTGACGGAGGCCAACTTTGATCAAGAAGTTGGCCAAGATCGCGGCGCTCTTGTCGAGTTCTACGCTCCCTGGTGTGGACACTGTAAAAGGCTCGCACCAGAGTATGAAAAACTGGGAGCAAGTTTTAAAAAAGCCAAATCCATTTTGATTGGGAAGGTAGATTGTGATGATCAAAAAAGCATTTGCAGCAAATATGGTGTCTCTGGTTATCCCACAATTCAATGGTTTCCTAAGGGATCTTTGGAACCAACGAAGTATGAAGGTGCACGTACTGCAGAAGCCCTCGCTGAGTTTGTAAACAAAGAAGGAGCTACCAATGTGAAGATAGCTTCTGTTCCATCCAGTGTGGTGGTTCTCACTCCAGATAACTTTGATCAGGTTGTATTGGATGAAACAAAAGACGTTCTGGTTGAGTTCTATGCTCCATGGTGTGGTCATTGTAAAGCCCTAGCCTCTACTTATGAGAAAGTTGCTACAGCATTCAAACTGGAGGAAGATGTTGTAATAGCAAATATTGATGCTGACCAACACAAAAATATTGCTGAGAAGTATGGTGTAAGTGGCTATCCTACTCTCAAATTTTTCCCAAGGAGCAATAAAGCTGGTGAAGATTATGATGGTGGCCGAGATTTGGATGACTTTGTAACTTTTATCAATGAGAAAAGTGGTACCAGCCGTGATGGGATAGGACAGCTTACCTCTAAAGCTGGTTTAGTACCAACTCTGGATGGCTTGGTGAAGGATTTTGTGAGTGCTTCTAGCGATGAAAAGAAAGAGGTCTATTCTCGGCTCAAGGAGGAAGCTAAGAAACTTGAGGGTTCTTCTGCAAGATATAGCAATATCTACTTAAAAGTTGCTAAAAACTGCATTGAAAAAGGAGCTGACTATGCATCAAAGGAGATTCAAAGACTTGAGCGCATACTTGACAAGTCAGTCAGCCCTGCAAAGGCAGATGAGCTCACTCTCAAGAAGAACGTCTTGTCTACGTTTGTTGCCTGA 1158 0.4326 MKKKEYWKGIKNRSDLRSSNREQVTMSSFSIWFALGALSLVFVSLVSADDVVVLTEANFDQEVGQDRGALVEFYAPWCGHCKRLAPEYEKLGASFKKAKSILIGKVDCDDQKSICSKYGVSGYPTIQWFPKGSLEPTKYEGARTAEALAEFVNKEGATNVKIASVPSSVVVLTPDNFDQVVLDETKDVLVEFYAPWCGHCKALASTYEKVATAFKLEEDVVIANIDADQHKNIAEKYGVSGYPTLKFFPRSNKAGEDYDGGRDLDDFVTFINEKSGTSRDGIGQLTSKAGLVPTLDGLVKDFVSASSDEKKEVYSRLKEEAKKLEGSSARYSNIYLKVAKNCIEKGADYASKEIQRLERILDKSVSPAKADELTLKKNVLSTFVA 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0024 385 PANTHER PROTEIN DISULFIDE-ISOMERASE C17H9.14C-RELATED 49 371 - -
Lele08g0024 385 SUPERFAMILY Thioredoxin-like 166 277 IPR036249 -
Lele08g0024 385 SUPERFAMILY ERP29 C domain-like 289 384 IPR036356 -
Lele08g0024 385 Pfam Thioredoxin 169 272 IPR013766 -
Lele08g0024 385 Pfam Thioredoxin 51 153 IPR013766 -
Lele08g0024 385 ProSitePatterns Thioredoxin family active site. 70 88 IPR017937 -
Lele08g0024 385 PRINTS Thioredoxin family signature 69 77 - -
Lele08g0024 385 PRINTS Thioredoxin family signature 238 249 - -
Lele08g0024 385 PRINTS Thioredoxin family signature 77 86 - -
Lele08g0024 385 FunFam Protein disulfide-isomerase A6 homolog 163 281 - -
Lele08g0024 385 CDD PDI_a_ERp38 168 271 - -
Lele08g0024 385 ProSiteProfiles Thioredoxin domain profile. 161 276 IPR013766 -
Lele08g0024 385 CDD PDI_a_ERp38 50 152 - -
Lele08g0024 385 FunFam Protein disulfide-isomerase A6 homolog 45 162 - -
Lele08g0024 385 Gene3D Glutaredoxin 45 161 - -
Lele08g0024 385 ProSiteProfiles Thioredoxin domain profile. 33 157 IPR013766 -
Lele08g0024 385 Gene3D Glutaredoxin 162 285 - -
Lele08g0024 385 CDD ERp29c 292 383 IPR011679 GO:0005783
Lele08g0024 385 Gene3D - 288 385 IPR036356 -
Lele08g0024 385 TIGRFAM pdi_dom: protein disulfide-isomerase domain 172 274 IPR005788 GO:0003756
Lele08g0024 385 TIGRFAM pdi_dom: protein disulfide-isomerase domain 54 155 IPR005788 GO:0003756
Lele08g0024 385 Coils Coil 307 327 - -
Lele08g0024 385 Pfam Endoplasmic reticulum protein ERp29, C-terminal domain 290 383 IPR011679 GO:0005783
Lele08g0024 385 ProSitePatterns Thioredoxin family active site. 189 207 IPR017937 -
Lele08g0024 385 SUPERFAMILY Thioredoxin-like 42 154 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0024 Lele-ChrLele08 150706 153803 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g0024 08 150706 153803 Lele08g0024 08 150706 153803 ECH
Lele06g0022 06 155904 158987 Lele08g0024 08 150706 153803 hybridization