Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1464 ATGGCGTTCACAGTGATGATGCTGGGTCTCGCTGTGGTTGTGGTGGCTAGTTCTCTATGGACTCAAACTGCTGCACAATCAAGCTGCACCAGTGCACTCACAAGCATGAGCCCTTGCCTTAACTATATAACGGGAAGTTCATCAACCCCATCTTCTACATGTTGCTCACAGCTCTCGAGTGTGGTTCAATCCTCACCACAGTGCCTCTGCTCTGTTCTTAGTGGCGGTGGTTCCTCTTTGGGAATCACCATTAATCAAACCCTTGCTCTCTCTCTCCCTGGTGCTTGCAAAGTTCAAACTCCACCCATCAGTCAATGCAAATCAGCTGGTAATTCACCGACAACTCCTTCCAATGCTCCGGCAGGATCTCCGGTTGGTTCTCCGGAAGGCTCCATCGCACCTTCAGACTCAGACATTCCTAATGCAGGGACAGGCTCTAAGACAGTGCCTACACTAGACGGTGGTTCATCAGATGGAAGCACCATGAAAATTTCCTTCCAGTCAATGCTCTCACTCCTTCTCATTGCGTCCTTCGTCTCTGCTGTCACTTACTGA 555 0.4991 MAFTVMMLGLAVVVVASSLWTQTAAQSSCTSALTSMSPCLNYITGSSSTPSSTCCSQLSSVVQSSPQCLCSVLSGGGSSLGITINQTLALSLPGACKVQTPPISQCKSAGNSPTTPSNAPAGSPVGSPEGSIAPSDSDIPNAGTGSKTVPTLDGGSSDGSTMKISFQSMLSLLLIASFVSAVTY 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1464 184 CDD AAI_LTSS 36 98 - -
Lele05g1464 184 Pfam Probable lipid transfer 12 106 IPR016140 -
Lele05g1464 184 PRINTS Plant phospholipid transfer protein signature 28 44 IPR000528 GO:0006869|GO:0008289
Lele05g1464 184 PRINTS Plant phospholipid transfer protein signature 83 100 IPR000528 GO:0006869|GO:0008289
Lele05g1464 184 PRINTS Plant phospholipid transfer protein signature 49 63 IPR000528 GO:0006869|GO:0008289
Lele05g1464 184 MobiDBLite consensus disorder prediction 137 157 - -
Lele05g1464 184 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 11 157 IPR043325 -
Lele05g1464 184 SMART aai_6 29 106 IPR016140 -
Lele05g1464 184 Gene3D - 26 106 IPR036312 -
Lele05g1464 184 MobiDBLite consensus disorder prediction 107 124 - -
Lele05g1464 184 FunFam Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 26 105 - -
Lele05g1464 184 MobiDBLite consensus disorder prediction 107 157 - -
Lele05g1464 184 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 28 107 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1464 Lele-ChrLele05 9405891 9406534 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1464 6 184 Lipid Metabolism Gene Families AT3G22600 52.174 6.26e-49 155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1464 05 9405891 9406534 Lele05g1464 05 9405891 9406534 ECH
Lele05g1464 05 9405891 9406534 Lele07g1526 07 9401802 9402435 hybridization
Lele05g1464 05 9405891 9406534 Lele08g1316 08 8410779 8414160 hybridization