Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1526 ATGATTCTGGGTCTCGCTGTGGTTGTGGTGGCTAGTTCTCTATGGACTCAAACTGCTGCACAATCAAGCTGCACCAGTGCACTCACAAGCATGAGCCCTTGCCTTAACTATGTAACGGGAAGTTCATCAACCCCATCTTCTACATGTTGCTCACAGCTCTCGAGTGTGGTTCAATCCTCACCACAGTGCCTCTGCTCTGTTCTTAGTGGCGGTGGTTCCTCTTTGGGAATCACCATTAATCAAACTCTTGCTCTCTCTCTCCCTGGTGCTTGCAAAGTTCAAACTCCACCCATCAGTCAATGCAAATCAGCTGGCAATGCACCGACCGCTCCTTCAAATGCTCCGGCGGGATCTCCGGTTGGTTCTCCGGAAGGCTCCATCGCACCTTCAGACTCAGACATTCCTAATGCAGGGACAGGCTCTAAGACAGTACCTACACTAGACGGTGGTTCATCAGATGGAAGCACCCTGAAAATTTCCTTCCAGTCAATGCTCTCACTCCTTCTCATTGCGTCCTTCGTCTCTGCTGTCACTTATTGA 540 0.5019 MILGLAVVVVASSLWTQTAAQSSCTSALTSMSPCLNYVTGSSSTPSSTCCSQLSSVVQSSPQCLCSVLSGGGSSLGITINQTLALSLPGACKVQTPPISQCKSAGNAPTAPSNAPAGSPVGSPEGSIAPSDSDIPNAGTGSKTVPTLDGGSSDGSTLKISFQSMLSLLLIASFVSAVTY 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1526 179 MobiDBLite consensus disorder prediction 102 151 - -
Lele07g1526 179 PRINTS Plant phospholipid transfer protein signature 44 58 IPR000528 GO:0006869|GO:0008289
Lele07g1526 179 PRINTS Plant phospholipid transfer protein signature 23 39 IPR000528 GO:0006869|GO:0008289
Lele07g1526 179 PRINTS Plant phospholipid transfer protein signature 78 95 IPR000528 GO:0006869|GO:0008289
Lele07g1526 179 Gene3D - 21 101 IPR036312 -
Lele07g1526 179 MobiDBLite consensus disorder prediction 132 151 - -
Lele07g1526 179 MobiDBLite consensus disorder prediction 102 116 - -
Lele07g1526 179 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 6 152 IPR043325 -
Lele07g1526 179 FunFam Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 21 100 - -
Lele07g1526 179 SMART aai_6 24 101 IPR016140 -
Lele07g1526 179 CDD AAI_LTSS 31 93 - -
Lele07g1526 179 Pfam Probable lipid transfer 8 101 IPR016140 -
Lele07g1526 179 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 23 102 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1526 Lele-ChrLele07 9401802 9402435 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1526 1 179 Lipid Metabolism Gene Families AT3G22600 51.630 7.10e-49 154
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g1526 07 9401802 9402435 Lele07g1526 07 9401802 9402435 ECH
Lele05g1464 05 9405891 9406534 Lele07g1526 07 9401802 9402435 hybridization