Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1316 ATGGCGTTCAGAGTGATGATTCTGGGTCTAGCTGTGGTTCTGTTGGCTAGTTCTCTATGGACTCAAACTGCTGCGCAATCAAGCTGCACAAGTGCACTGACAAGCATGAGCCCCTGCCTTAACTATATAACGGGAAGTTCATCAACCCCATCTTCTGCATGTTGCTCACAGCTCTCGAGTGTGGTTCAATCCTCACCACAGTGCCTCTGCTCTGTTCTTAATGGCGGCGGTTCCTCTCTGGGAATCACCATTAATCAAACTCTTGCTCTCTCTCTCCCTGGTGCATGCAAAGTTCAAACTCCTCCCATCAGCCAATGCAAATCAGCTAGTAATGCACCGACCACTCCTTCAAATGCTCCGGCAGGTTCTCCGGTTGGTTCTCCCGAAGGATCCATCGCACCTTCAGACTCAGACGTTCCTAATGCAGGGACAGGCTCTAAGACGGTGCCTAGAGTAGACGGTGGTTCATCAGATGGAAGCACCGTGAAAATTTCCTTCCACATACCTATGCTAGTCATAACCTCTCAACCAAAATTTCCTTTGAAAAACCACCTGAGCACTACTACAGCATTAGACGATTTCACTCTCCACAACCCCATCCTGTTCTTGCTGCACTCAGCTTCTCAGTGTGGTTCAGTCACAACCAGAGTGCCCATGCCCCTGCAGCATTTAGTGGAGCTACTGCAATCCTGGGCTCTAGGGTCACTAGTTATGTCAAAAGCCCCACCAGCTAGCCAGTGCAAAGGTGCAGGAGCTGGGTCCAAAACTTTGCCCTCATACCATAGACCATCTGATGGAAGCATCAAGGAGTCACCCGTTAAACGTAGTTGTACTACATTGTCCCTTGTGGTGGCTCTTTGGGGATTCACAGTGGCTCAGAATGATTCTAGCTGCACCAACGTGCTCATAAGTTTGTCTCCTTGCTTAGACTATGTAACAGGAAACGCCTCCGTTCCTTCTTCTGCTTGTTGCTCCCAACTCGCTTCTGTGGTGAGTTCACAGCCACAGTGCCTTTGCCAGGTCGTCAATGGCGCCGCCGCTTCAGCGGTGGGCATCAACATCAATCAGACTCAGGCTTTGACACTCCCTAGTGCCTGCAGAGTCCAGACACCTCCTCTTAGCATTTGTCAAGCTTCTTCTCCTACGACTGATTCCGCTGCTACTGTGACGACAAGTTTCCCTTCAGGAAATGGGTATAGTACTTTTTCATCAACTAGCGGAAGTGGCACAAGCTCGTCCCATGGGAATTCCGTTAAAAAGCCATCTTCTCTGCCTGGCTTCTTTATCTTTGTGACATGTTTGGGTTTTGTATTGACTTGGAACTGA 1326 0.494 MAFRVMILGLAVVLLASSLWTQTAAQSSCTSALTSMSPCLNYITGSSSTPSSACCSQLSSVVQSSPQCLCSVLNGGGSSLGITINQTLALSLPGACKVQTPPISQCKSASNAPTTPSNAPAGSPVGSPEGSIAPSDSDVPNAGTGSKTVPRVDGGSSDGSTVKISFHIPMLVITSQPKFPLKNHLSTTTALDDFTLHNPILFLLHSASQCGSVTTRVPMPLQHLVELLQSWALGSLVMSKAPPASQCKGAGAGSKTLPSYHRPSDGSIKESPVKRSCTTLSLVVALWGFTVAQNDSSCTNVLISLSPCLDYVTGNASVPSSACCSQLASVVSSQPQCLCQVVNGAAASAVGININQTQALTLPSACRVQTPPLSICQASSPTTDSAATVTTSFPSGNGYSTFSSTSGSGTSSSHGNSVKKPSSLPGFFIFVTCLGFVLTWN 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1316 441 Gene3D - 295 373 IPR036312 -
Lele08g1316 441 Gene3D - 26 106 IPR036312 -
Lele08g1316 441 FunFam Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 26 105 - -
Lele08g1316 441 CDD AAI_LTSS 36 98 - -
Lele08g1316 441 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 12 150 IPR043325 -
Lele08g1316 441 PRINTS Plant phospholipid transfer protein signature 353 370 IPR000528 GO:0006869|GO:0008289
Lele08g1316 441 PRINTS Plant phospholipid transfer protein signature 297 313 IPR000528 GO:0006869|GO:0008289
Lele08g1316 441 PRINTS Plant phospholipid transfer protein signature 318 332 IPR000528 GO:0006869|GO:0008289
Lele08g1316 441 SMART aai_6 29 106 IPR016140 -
Lele08g1316 441 SMART aai_6 298 376 IPR016140 -
Lele08g1316 441 MobiDBLite consensus disorder prediction 107 157 - -
Lele08g1316 441 CDD AAI_LTSS 305 368 - -
Lele08g1316 441 MobiDBLite consensus disorder prediction 247 268 - -
Lele08g1316 441 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 28 107 IPR036312 -
Lele08g1316 441 MobiDBLite consensus disorder prediction 137 157 - -
Lele08g1316 441 FunFam Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 295 375 - -
Lele08g1316 441 MobiDBLite consensus disorder prediction 107 124 - -
Lele08g1316 441 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 297 377 IPR036312 -
Lele08g1316 441 Pfam Probable lipid transfer 292 376 IPR016140 -
Lele08g1316 441 Pfam Probable lipid transfer 18 106 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1316 Lele-ChrLele08 8410779 8414160 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1316 280 428 Lipid Metabolism Gene Families AT3G22600 49.020 2.70e-36 129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g1316 08 8410779 8414160 Lele08g1316 08 8410779 8414160 ECH
Lele05g1464 05 9405891 9406534 Lele08g1316 08 8410779 8414160 hybridization