Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1044 ATGTCTCAAGCCAAGAAATTGACGCCGAATCTTGATCAGCAGAGCACGAAGATGCTCAATCTCACTGTTCTTCAGAGGAGGGATCCATGCATCGAAGAGATTTTGTTTACTGCTTCTCATGTTTCCTTCTACTCGTTCAACATCGAAAGCAACCAATGGAGTCGTAAGGATGTCGAAGGATCTCTCTTTGTCGTGAAGAGGAATGCAGAACCTCAGTTTCAATTCATAGTAATGAACCGCCGCAATGCAGATAACCTAGTGGAAAATCTATTGGATTTTGAGTATGAACTGAAAAGGCCATACTTATTATATAGGAATGCTGCCCAAGAAGTTAATGGTATATGGTTTTACAATTCAGATGAAAGTGAAGAAGTTGCAAATCTCTTTAATAGCATACTTGATGCATACTCGAAGGCAGCTCCAAAGACAAAATTGCCTTATAGCAAAAGTGAATTTGAGGAACTTGAACCAGTAGCAATTGTAGCAGAAAAGCATCTGAAGTCGTCTTTAGCCACCCCTTCCACAATTGGTGCACTTGAAGATCCTGCATTTGCAGACTGCCTCGATACAGATAAGGTCACCGGTAACTATACTTCAAACGTGGAAAGTTTAAGACAGCCCTACCATTCTGGAAATGTTGCTTCTGCTGCTCCCAGTGGTGTGTTTTCTGCTGCCCCATCTATAAATGCACCATATGCTTCTCATTCAGCTTCATTGCTACCAGCCTTCCTACACGACTCTTCTGATACAAGCAACAGGGGCAGTCAAAACGCCAATCTTTTGAATCCTTCTACATTTTTAACATCCCCTCTCTCTCCTTCTGCACCTTCTGCAGCTTTTCTTAATTTCCTGAATCAGCCACAGCTACAGCCACGTCAACATGGCACGCTGTTGCTTCAACCATTTCCACCGCCAAGTCCACCTCCATCTCTTGACCCAACTACTACCTCCCCCACGAACAAGCCTGTTATCAGAAGAGAGAAAGTGCGTGATGCACTTTTATCACTTGCCCAGGATGATCAATTCGTTGACATGGTGTTTCAGACATTGCTAAAGCCGCACCATTGA 1068 0.4345 MSQAKKLTPNLDQQSTKMLNLTVLQRRDPCIEEILFTASHVSFYSFNIESNQWSRKDVEGSLFVVKRNAEPQFQFIVMNRRNADNLVENLLDFEYELKRPYLLYRNAAQEVNGIWFYNSDESEEVANLFNSILDAYSKAAPKTKLPYSKSEFEELEPVAIVAEKHLKSSLATPSTIGALEDPAFADCLDTDKVTGNYTSNVESLRQPYHSGNVASAAPSGVFSAAPSINAPYASHSASLLPAFLHDSSDTSNRGSQNANLLNPSTFLTSPLSPSAPSAAFLNFLNQPQLQPRQHGTLLLQPFPPPSPPPSLDPTTTSPTNKPVIRREKVRDALLSLAQDDQFVDMVFQTLLKPHH 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1044 355 MobiDBLite consensus disorder prediction 296 321 - -
Lele05g1044 355 CDD EVH1-like_Dcp1 19 133 - -
Lele05g1044 355 MobiDBLite consensus disorder prediction 298 315 - -
Lele05g1044 355 Gene3D - 7 136 IPR011993 -
Lele05g1044 355 FunFam mRNA-decapping enzyme-like protein 9 135 - -
Lele05g1044 355 Pfam Dcp1-like decapping family 17 130 IPR010334 GO:0000290|GO:0008047|GO:0043085
Lele05g1044 355 PANTHER TRANSCRIPTION FACTOR SMIF DECAPPING ENZYME DCP1 10 354 IPR010334 GO:0000290|GO:0008047|GO:0043085
Lele05g1044 355 SUPERFAMILY PH domain-like 19 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1044 Lele-ChrLele05 6490702 6496461 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1044 05 6490702 6496461 Lele05g1044 05 6490702 6496461 ECH
Lele05g1044 05 6490702 6496461 Lele07g1079 07 6517438 6523536 hybridization
Lele05g1044 05 6490702 6496461 Lele08g0892 08 5634645 5643472 hybridization