Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1079 ATGTCTCAAGCCAAGAAATTGACGCCGAATCTTGATCAGCAGAGCACGAAGATGCTCAATCTCACTGTTCTTCAGAGGAGAGATCCATGCATCGAAGAGATTTTGTTTACTGCCTCTCATGTTTCCTTCTACTCGTTTAACATCGAAAGCAATCAATGGAGTCGTAAGGATGTCGAAGGATCTCTCTTTGTCGTGAAGAGGAATGCAGAACCTCAGTTTCAATTCATAGTAATGAACCGCCGCAATGCAGATAACCTAGTGGAAAATCTATTGGATTTTGAGTATGAACTGAAAAGGCCATACTTATTATATAGGAATGCTGCCCAAGAAGTAAATGGTATATGGTTTTACAATTCAGATGAAAGTGAAGAAGTTGCAAATCTCTTTAATAGCATACTTGATGCATACTCGAAGGCAGCTCCAAAGACAAAATTGCCTTATAGCAAAAGTGAATTTGAGGAACTTGAACCAGTAGCAATTGTAGCAGAAAAGCATCTGAAGTTGTCTTCAGCCACCCCTTCCACAATTGGTGCACTTGAAGATCCTGCATTTGTAGACTGCCTCGATACAGGTAAGGTCACCGGTACCTATGCTTCGAATGTGGGAAGTTTAAGACAGCCCTACCATTCTGGAAATGTTGCTTCTGCTGCTCCCAGTGGTGTGTTTTCTGCTGCCCCATCTATGAATGCACCATCTGCTTCTCATTCAGCTTCATTGCTACCAGCCTTCCTACACGACTCTTCTGATACAAGCAACAGGGGCAGTCAAAACGCCAATCTTTTGAACCCTTCTACATTTTTAACATCCCCTCTCTCCCCTTCTGCACCTTCTGCAGCTTTTCTTAATTTCCTGAATCAGCCACAGCCACAGCCACGTCAACATGGCACGCCGTTGCTTCAACCATTTCCACCGCCAAGTCCACCTCCATCTCTTGACCAATCTAATACCTGCCCCCCGTACAAGCCTGTTATCAGAAGAGAGAGAGTGCGTGATGCACTTTTATCACTTGCCCAGTTATACTGTTTAGGCAGGAACACATCTCTTGGTGTTACTTCATATAGATTTCCGTCTGTCCTAAGCTTTGACCACCGCTCAGCATTTCGTATTTTTGGTACAGACTACAGACGTAAAGAGTTCAATTGA 1143 0.4366 MSQAKKLTPNLDQQSTKMLNLTVLQRRDPCIEEILFTASHVSFYSFNIESNQWSRKDVEGSLFVVKRNAEPQFQFIVMNRRNADNLVENLLDFEYELKRPYLLYRNAAQEVNGIWFYNSDESEEVANLFNSILDAYSKAAPKTKLPYSKSEFEELEPVAIVAEKHLKLSSATPSTIGALEDPAFVDCLDTGKVTGTYASNVGSLRQPYHSGNVASAAPSGVFSAAPSMNAPSASHSASLLPAFLHDSSDTSNRGSQNANLLNPSTFLTSPLSPSAPSAAFLNFLNQPQPQPRQHGTPLLQPFPPPSPPPSLDQSNTCPPYKPVIRRERVRDALLSLAQLYCLGRNTSLGVTSYRFPSVLSFDHRSAFRIFGTDYRRKEFN 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1079 380 Gene3D - 7 136 IPR011993 -
Lele07g1079 380 CDD EVH1-like_Dcp1 19 133 - -
Lele07g1079 380 MobiDBLite consensus disorder prediction 294 315 - -
Lele07g1079 380 PANTHER TRANSCRIPTION FACTOR SMIF DECAPPING ENZYME DCP1 10 338 IPR010334 GO:0000290|GO:0008047|GO:0043085
Lele07g1079 380 MobiDBLite consensus disorder prediction 285 315 - -
Lele07g1079 380 Pfam Dcp1-like decapping family 17 130 IPR010334 GO:0000290|GO:0008047|GO:0043085
Lele07g1079 380 SUPERFAMILY PH domain-like 19 138 - -
Lele07g1079 380 FunFam mRNA-decapping enzyme-like protein 9 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1079 Lele-ChrLele07 6517438 6523536 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g1079 07 6517438 6523536 Lele07g1079 07 6517438 6523536 ECH
Lele05g1044 05 6490702 6496461 Lele07g1079 07 6517438 6523536 hybridization
Lele06g0902 06 5609821 5619041 Lele07g1079 07 6517438 6523536 hybridization