Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0993 ATGGACAGTTTATTCTCGGATCACTATGAGTACTTCTGGGACCTCGATTCCCGTCCACAACGTAGCTACGTCCGAGAAGAAGAGCCTCAATTGGAGAATGAGCCCCTCTACTTGGTTCTTTACAGGTGGTGGAAGGAAGTAAACTGGGACTCTGATCGAGTAGAACATGTCCTATACACAGTATCAACGAACTCTGATTTTGAGTCTGAATCAGAAATTGTTCTTCAGTTAAGGAAGGAAGAAAACCGGGAGGAAACGATGAATAGTGAGGTGGGTTCTTCAGGCCGTCAATATGCGTTGGTTCCTGAAGGTCTGTGGTTGCGTGCTCTTAAAAGGTGTAGTGATTATAGTTATGCAGTGAAGGATTTTTGGAGCCCCTTCTATACAGATGATTGTTTGCCAGATTTGTTCTCCTTGCAAGTTAGGATGTTTGTTTCATGGGAAACAAATTCATTGGTAGCAAAGATAAGCCAAAAGGAAAATACGGTTGATGTCTACATAAAAGCCTGCAATATTTTCAGCTCTGAATATAACCCAGTTCTCTTGGAGCTGCAAGTTTATGGACTTTCTGATTCTATAAAGGTTAATGGAAGCAATGAGACGTTTGTAGATAGATCTACAGTGGAATGTTCGTCTCTCAGTGGCTCTGTTATGATGAATGGGACCACTCACAATGTGAATTCCAATGGTCAGTTCCGTTCAACATTGGTCTGCCCTGTTTGCAAGAAGGTTTCTATAACTTTTGACCCTTTTATGCACCTATCTTTGCCGTTACCTTCTGCAACAATGCGGACAATTACTTTGACTGTCCTGAGCACTGATGGGATTGCCCTGCCTTTCACATTTACCATAACATTACCCAAGAGTGGATTATTGAAGGATCTTATTGAGGCCTTAGGTGATGCATGTTCCTTAAGAGATGATGAGAAGCTCTTGGTCGCTGAGATATACAGGAATCGTATACGTCGTCTGTTGGAGGAACCGTCAGATTCATTAGCCTTGATTAGAGATGAGGACAAACTAGTTGCTTACCGATTGCCAAAAGATGAGGCTGGCCCCTTGGTTGTTTTCATGCATCAGCAAGTGACGAAGCAGTGCAGTTTGGGAAGAGAGAAGTTGGTAGAAAGTTTGTTCGGCATTCCTATTGTGGCAAGGTTGCCCAATGTTTCCTGTGGATATGACATTCGCAGGGAGTTTCTGAAGTTAATTAATCCATTTCTGATGCCCTCTGACGATTTCTTAGATGAGCATGATAATGATATTGAAGTTAGTAAAGATAAGGAGTTGAGTGATGCCACTGGTTCTGCGTGCTTGGAAGGTGATTCAGATTCAGATTTGGAGGCTACCTTTAAATTCTACTTAACTGCACGGCTAGGAATGGAGAATGTGGAGATAGAAATGGATAAACCATTAGCATTCACACTGCTACCCAAGAAGCTGGAGGTTTCTGTCTTATGGTCTTACAAGATGATAGAAAAATATGATACATGCCTACTCAGCTCATTGCCTGAGGTTTTCAAGCCAAATTTATTCGCCAAGAGAACACAAGAATCTGTTTCTGTTTACAAGTGCCTTGAAGCATTCTTAAAAGAGGAGCCTCTTGGGCCAGATGACATGTGCCGATACTTCAAGAACAAGCTAGAAACATTTGTCGATTTCCCCATCAGTGATTTGGACCTGTCAACATATGTTGCCCACAAGAATAGCCCATCTTCCCCCCATTACGAGTTGTATGCAATCAGCTGTCATTATGGAGGATTGGGAGGAGGTCATTATACAGCATTTGTCCGTGTAAGTACCTCTTTATAG 1809 0.4229 MDSLFSDHYEYFWDLDSRPQRSYVREEEPQLENEPLYLVLYRWWKEVNWDSDRVEHVLYTVSTNSDFESESEIVLQLRKEENREETMNSEVGSSGRQYALVPEGLWLRALKRCSDYSYAVKDFWSPFYTDDCLPDLFSLQVRMFVSWETNSLVAKISQKENTVDVYIKACNIFSSEYNPVLLELQVYGLSDSIKVNGSNETFVDRSTVECSSLSGSVMMNGTTHNVNSNGQFRSTLVCPVCKKVSITFDPFMHLSLPLPSATMRTITLTVLSTDGIALPFTFTITLPKSGLLKDLIEALGDACSLRDDEKLLVAEIYRNRIRRLLEEPSDSLALIRDEDKLVAYRLPKDEAGPLVVFMHQQVTKQCSLGREKLVESLFGIPIVARLPNVSCGYDIRREFLKLINPFLMPSDDFLDEHDNDIEVSKDKELSDATGSACLEGDSDSDLEATFKFYLTARLGMENVEIEMDKPLAFTLLPKKLEVSVLWSYKMIEKYDTCLLSSLPEVFKPNLFAKRTQESVSVYKCLEAFLKEEPLGPDDMCRYFKNKLETFVDFPISDLDLSTYVAHKNSPSSPHYELYAISCHYGGLGGGHYTAFVRVSTSL 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0993 602 Gene3D Cysteine proteinases 173 286 - -
Lele05g0993 602 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 575 592 IPR018200 GO:0004843|GO:0006511
Lele05g0993 602 Gene3D Cysteine proteinases 484 601 - -
Lele05g0993 602 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 229 539 - -
Lele05g0993 602 Pfam Ubiquitin carboxyl-terminal hydrolase 229 597 IPR001394 GO:0004843|GO:0016579
Lele05g0993 602 SUPERFAMILY Cysteine proteinases 227 598 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0993 Lele-ChrLele05 6126649 6132868 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0993 05 6126649 6132868 Lele07g1028 07 6186971 6193829 hybridization
Lele05g0993 05 6126649 6132868 Lele08g0842 08 5294732 5302204 hybridization