Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0889 ATGGGGTCTCTTGCAAAGGGAAGGATACTGATATCTGATCATGCTCACTTGTTGTTTGATTTTCACCAAGTAGTTGATGGACTAAGAGAGGCTGAGCTTGCTAAATCTTTTATTGGAACTACCAAGAGAGGCATTGGACCCTGTTATTCTAGCAAGGTTATCCGTAATGGCATTAGAGTAAGTGATTTGAAGTATATGGATACTTTTCCTCGGAAGCTTGATCTTTTGCTATCAGATGCGGCATTAAGATTCAAAGATTTTAACCCAAGTCCAGACATGCTCAGGGAAGAAGTTGAAAGCTATAGTACAAAAGAAGAAGGTTCTTGTTGGGGGGGGGGGTGTCAAGCAACAATGTTGGACATTGATTTTGGAACCTATCCCTTTGTAACTTCATCCAGTCCATCAGCAGGCGGGATTTGTACTGGTCTAGGTATTGCTCCAAGAGTTATTGGTGATCTAATTGGTGTGGTTAAAGCATACACTACAAGGGTTGGTTCTGGGCCTTTTCCCACTGAAATCTTGGGTCAGGAGGATATTGCTGTCAGATCAATGGGTTTTCATCACTCAATCACCAAGCTGGATGTTTTGTCAGAATTTGTTGAAATTAAATTGGGTGTGTCTCATAAACACGTTGATGGTACATCAATCAAGTCATTCCCTTCAGATCTCCGTCTTCTAGACCAGTTGAAGGTGGAGTATGAGGTACTTCCGGGGTGGAAGTGTGATATTTCATCTATCAGAAACTATTCTGAACTTCCAAGAGCTGCACGCCATTATGTGGAAAGAATAGAAGAACTTCTTGAGTATGAAGCACCTCCAGGATGGAACTTCGATATTTTCCCCCCAAGAAACTATTGTTGTGAGCTTCGAACAGCTTCACTCCATTATGTGGAAAGGATTGAAGAACTTGCTGCTGTACCCATTCATTACATTGATGTTTGGCCTTAA 948 0.4167 MGSLAKGRILISDHAHLLFDFHQVVDGLREAELAKSFIGTTKRGIGPCYSSKVIRNGIRVSDLKYMDTFPRKLDLLLSDAALRFKDFNPSPDMLREEVESYSTKEEGSCWGGGCQATMLDIDFGTYPFVTSSSPSAGGICTGLGIAPRVIGDLIGVVKAYTTRVGSGPFPTEILGQEDIAVRSMGFHHSITKLDVLSEFVEIKLGVSHKHVDGTSIKSFPSDLRLLDQLKVEYEVLPGWKCDISSIRNYSELPRAARHYVERIEELLEYEAPPGWNFDIFPPRNYCCELRTASLHYVERIEELAAVPIHYIDVWP 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0889 315 Pfam Adenylosuccinate synthetase 189 269 IPR001114 GO:0000166|GO:0004019|GO:0006164
Lele05g0889 315 Pfam Adenylosuccinate synthetase 6 185 IPR001114 GO:0000166|GO:0004019|GO:0006164
Lele05g0889 315 Gene3D Adenylosuccinate Synthetase, subunit A, domain 3 157 184 IPR042111 -
Lele05g0889 315 FunFam Adenylosuccinate synthetase 13 107 - -
Lele05g0889 315 Gene3D Adenylosuccinate Synthetase, subunit A, domain 2 13 107 IPR042110 -
Lele05g0889 315 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 269 IPR027417 -
Lele05g0889 315 PANTHER ADENYLOSUCCINATE SYNTHETASE 189 269 IPR001114 GO:0000166|GO:0004019|GO:0006164
Lele05g0889 315 Hamap Adenylosuccinate synthetase [purA]. 1 315 IPR001114 GO:0000166|GO:0004019|GO:0006164
Lele05g0889 315 ProSitePatterns Adenylosuccinate synthetase active site. 44 55 IPR033128 -
Lele05g0889 315 Gene3D Adenylosuccinate Synthetase, subunit A, domain 3 185 271 IPR042111 -
Lele05g0889 315 SMART adenylsucc_synt 4 269 IPR001114 GO:0000166|GO:0004019|GO:0006164
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0889 Lele-ChrLele05 5463447 5465174 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0889 05 5463447 5465174 Lele05g0889 05 5463447 5465174 ECH
Lele05g0889 05 5463447 5465174 Lele07g0928 07 5536120 5539479 hybridization
Lele05g0889 05 5463447 5465174 Lele08g0745 08 4635004 4639555 hybridization