Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0928 ATGGAACTTCTAGTTCTTAGTACTGGCCTGTATGGTAGCCGAAAGGGTGGAGCTAATGCTAGGCATACCGTTTATAACGCTGAAGGAAAAAAATTTGGTCTTCATCTTGTTCCTTCTGGTATACTGAATGAGGATACATTAATCCAATGGGTTCTCTTGCAAGGGATACTGATATCGGATCGTGCTCACTTGTTGTTTGATTTTCACCAAGTAGTTGATGGACTAAGAGAGGCTGAGCTTGCTAAATCTTTTATTGGAACTACCAAGAGAGGCATTGGACCCTGTTATTCTAGCAAGGTTATCCGTAATGGCATTAGAGTAAGTGATTTGAAGTATATGGATACTTTTCCTCAGAAGCTTGATCTTTTGTTATCAGATGCGGCATTAAGATTCAAAGATTTTAACCCAAGTCCAGACATGCTCAGGGAAGAAGTTGAAAGTCCATCAGCAGGCGGGATTTGTATTGGTCTAGGTATTGCTCCAAGAGTTATTGGTGATCTAATTGGTGTGGAGGGTGATCTCCTTAGATTTGCTGGGCAGGAGTTTGGCACAACTACTGGTCGTCCCAGACGCTGTTGTTGGCTTGATATAGTTGCATTAAGATATTGCTGTCAGATCAATGGGTTTTCATCACTCAATCTCACCAAGCTGGATGTTTTGTCAGAATTTGCTGAAATTAAATTGGGTGTGGAGTATGAGGTACTTCCGGGGTGGAAGTATGATATTTCATCTATCAGAAACTATTCTGAACTTCCAAGAGCTGCGCGCCATGATGTGGAAAGAATAGAAGAACTTCTTGGTCTGCCAATTCACTACATTGGTGTTGGACCTGGGCGAGATGCTTTCATTGATAAATAA 858 0.4149 MELLVLSTGLYGSRKGGANARHTVYNAEGKKFGLHLVPSGILNEDTLIQWVLLQGILISDRAHLLFDFHQVVDGLREAELAKSFIGTTKRGIGPCYSSKVIRNGIRVSDLKYMDTFPQKLDLLLSDAALRFKDFNPSPDMLREEVESPSAGGICIGLGIAPRVIGDLIGVEGDLLRFAGQEFGTTTGRPRRCCWLDIVALRYCCQINGFSSLNLTKLDVLSEFAEIKLGVEYEVLPGWKYDISSIRNYSELPRAARHDVERIEELLGLPIHYIGVGPGRDAFIDK 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0928 285 ProSitePatterns Adenylosuccinate synthetase active site. 91 102 IPR033128 -
Lele07g0928 285 SMART adenylsucc_synt 8 284 IPR001114 GO:0000166|GO:0004019|GO:0006164
Lele07g0928 285 Hamap Adenylosuccinate synthetase [purA]. 167 285 IPR001114 GO:0000166|GO:0004019|GO:0006164
Lele07g0928 285 Gene3D Adenylosuccinate Synthetase, subunit A, domain 1 2 51 IPR042109 -
Lele07g0928 285 PANTHER ADENYLOSUCCINATE SYNTHETASE 230 283 IPR001114 GO:0000166|GO:0004019|GO:0006164
Lele07g0928 285 FunFam Adenylosuccinate synthetase 60 147 - -
Lele07g0928 285 Gene3D Adenylosuccinate Synthetase, subunit A, domain 2 60 150 IPR042110 -
Lele07g0928 285 Pfam Adenylosuccinate synthetase 55 135 IPR001114 GO:0000166|GO:0004019|GO:0006164
Lele07g0928 285 Pfam Adenylosuccinate synthetase 172 234 IPR001114 GO:0000166|GO:0004019|GO:0006164
Lele07g0928 285 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 15 283 IPR027417 -
Lele07g0928 285 Gene3D Adenylosuccinate Synthetase, subunit A, domain 3 232 285 IPR042111 -
Lele07g0928 285 Gene3D Adenylosuccinate Synthetase, subunit A, domain 3 156 231 IPR042111 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0928 Lele-ChrLele07 5536120 5539479 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g0928 07 5536120 5539479 Lele07g0928 07 5536120 5539479 ECH
Lele05g0889 05 5463447 5465174 Lele07g0928 07 5536120 5539479 hybridization
Lele06g0746 06 4582645 4586843 Lele07g0928 07 5536120 5539479 hybridization