Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0745 ATGAGCCTCTCGCTCCTCACACTCGATCCCTTAACTGTCTCCACCTCTCGCAGGGCCCGCGAAATCCACCGCAGGCCTCCTATTCCTCGCCGGAGCATTGTCCTTTGCTCTGCAAAGCCCTCGGTGTCCGCTCCTTCCAATCCCAGCTCGGCTGATTCTTCTTCCACTGTTGATGCGCTGAGTCGAATTGGGTCCCTCAGTCAGGTATCCGGTGTTTTAGGTAGCCAGTGGGGCGATGAAGGTAAAGGCAAGCTCGTGGATATCCTAGCCCGCCACTTCGATATCGTTGCTCGTTGTCAAGGTGGAGCTAATGCTGGGCATACCATTTATAACGCCGAAGGAAAAAAATTTGGTCTTCATCTTGTTCCTTCTGGTATACTTAATGAGGATACATCGTGTGTTATTGGGAATGGGGTTGTAGTGCATCTGCCACAGTTTTTTAAAGAGATTGATGGCTTAGAATCCAATGGGGTCTCTTGCAAGGGAAGGATACTGATATCTGATCGTGCTCACTTGTTGTTTGATTTTCACCAAGTAGTTGATGGACTAAGAGAGGCTGAGCTTGCTAAATCTTTTATTGGAACTACCAAGAGAGGCATTGGACCCTGTTATTCTAGCAAGGTTGTCCGTAATGGCATTAGAGTAAGTGATTTGAAGTACATGGATACTTTTCCTCAGAAGCTTGATCTTTTGTTATCAGATGCGGCATTAAGATTCAAAGATTTTAACTATAGTCCAGACATGCTCAGGGAAGAAGTTGAAAGGTACAAGAGATATGCTGAGAGATTGGAACCCTTCATTGCTGATACTGTACATTTCATGAATGAAGCTATATCACAAAAGAAGAAGGTTCTTGTTGAAGGGGGTCAAGCAACAATGTTGGACATTGATTTTGGAACCTATCCCTTTGTAACTTCATCCAGTCCATCAGCAGGTGGGATTTGTACTGGTCTAGGTATTGCTCCAAGAGTTATTGGTGATCTAATTGGTGTGGTTAAAGCATACACTACAAGGGTTGGTTCTGGGCCTTTTCCCACTGAAATCTTGGGTCAGGAGGGTGATCTCCTTAGATTTGCTGGGCAGGAGTTTGGCACAACTACTGGTCGTCCCAGACGCTGTGGTTGGCTTGATATAGTTGCATTAAGATATTGCTGTCAGATCAATGGGTTTTCATCACTCAATCTCACCAAGCTGGATGTTTTGTCAGAATTTGATGAAATTAAATTGGGTGGGTCTTATAAACACGTTGATGGTACACCAATCAAGTCATTCCCTTCAGATCTCCGTCTTCTAGACCAATTGAAGGTGGAGTATGAGGTACTTCCGGGGTGGAAGTGTGATATTTCATCCATCAGAAAGTATTCTGAACTACCAAGAGCTGCACGCCATTATGTGGAAAGAATAGAAGAACTCCTTGGTCTGCCAATTCACTACATTGGTGTGGGACCTGGGCGTGATGCTCTCATTTACAAATAA 1476 0.4472 MSLSLLTLDPLTVSTSRRAREIHRRPPIPRRSIVLCSAKPSVSAPSNPSSADSSSTVDALSRIGSLSQVSGVLGSQWGDEGKGKLVDILARHFDIVARCQGGANAGHTIYNAEGKKFGLHLVPSGILNEDTSCVIGNGVVVHLPQFFKEIDGLESNGVSCKGRILISDRAHLLFDFHQVVDGLREAELAKSFIGTTKRGIGPCYSSKVVRNGIRVSDLKYMDTFPQKLDLLLSDAALRFKDFNYSPDMLREEVERYKRYAERLEPFIADTVHFMNEAISQKKKVLVEGGQATMLDIDFGTYPFVTSSSPSAGGICTGLGIAPRVIGDLIGVVKAYTTRVGSGPFPTEILGQEGDLLRFAGQEFGTTTGRPRRCGWLDIVALRYCCQINGFSSLNLTKLDVLSEFDEIKLGGSYKHVDGTPIKSFPSDLRLLDQLKVEYEVLPGWKCDISSIRKYSELPRAARHYVERIEELLGLPIHYIGVGPGRDALIYK 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0745 491 TIGRFAM purA: adenylosuccinate synthase 72 489 IPR001114 GO:0000166|GO:0004019|GO:0006164
Lele08g0745 491 ProSitePatterns Adenylosuccinate synthetase active site. 199 210 IPR033128 -
Lele08g0745 491 CDD AdSS 68 490 IPR001114 GO:0000166|GO:0004019|GO:0006164
Lele08g0745 491 Hamap Adenylosuccinate synthetase [purA]. 1 491 IPR001114 GO:0000166|GO:0004019|GO:0006164
Lele08g0745 491 Pfam Adenylosuccinate synthetase 72 489 IPR001114 GO:0000166|GO:0004019|GO:0006164
Lele08g0745 491 FunFam Adenylosuccinate synthetase 332 491 - -
Lele08g0745 491 FunFam Adenylosuccinate synthetase, chloroplastic 168 266 - -
Lele08g0745 491 SMART adenylsucc_synt 69 490 IPR001114 GO:0000166|GO:0004019|GO:0006164
Lele08g0745 491 Gene3D Adenylosuccinate Synthetase, subunit A, domain 2 168 266 IPR042110 -
Lele08g0745 491 Gene3D Adenylosuccinate Synthetase, subunit A, domain 1 72 331 IPR042109 -
Lele08g0745 491 ProSitePatterns Adenylosuccinate synthetase GTP-binding site. 76 83 IPR018220 GO:0005525
Lele08g0745 491 PANTHER ADENYLOSUCCINATE SYNTHETASE 52 491 IPR001114 GO:0000166|GO:0004019|GO:0006164
Lele08g0745 491 Gene3D Adenylosuccinate Synthetase, subunit A, domain 3 332 491 IPR042111 -
Lele08g0745 491 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 68 490 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0745 Lele-ChrLele08 4635004 4639555 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g0745 08 4635004 4639555 Lele08g0745 08 4635004 4639555 ECH
Lele05g0889 05 5463447 5465174 Lele08g0745 08 4635004 4639555 hybridization
Lele06g0746 06 4582645 4586843 Lele08g0745 08 4635004 4639555 hybridization