Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0700 ATGGCTCTCTGCTTCTATCCCTCCCTCATCACAGAAGCGAGAACTGGTCTCTATACAACCGAAAGAACAATGGCATCCCATATTGTCGGATATCCTCGCATGGGCCCCAAGAGAGAGCTCAAGTTCGCTCTGGAGTCATTCTGGGATGGGAAGAGCAGCGCTGAAGATTTGAAGAAGGTGGCTGCTGATCTCAGGGCATCAATCTGGAAGCAGATGGCTGATGTTGGGATCAAATACATCCCCAGCAACACATTTTCTTTCTATGATCAGGTGCTTGATGCTACTGCCCTTCTTGGTGCTGTTCCACCTAGATATGGATGGACTGGTGGGGAGATTGGATTTGATACCTACTTCTCCATGGCCAGAGGTAATGCATCAGTACCTGCAATGGAGATGACCAAATGGTTCGACACCAACTATCACTTTATTGTCCCTGAATTGGGACCTGATGTGAACTTCTCTTACGCTTCTCACAAAGCCGTGGACGAGTACAAGGAAGCCAAAGCTCTTGGAGTAGATACAGTTCCAGTCCTGATTGGTCCTGTCTCGTACTTGTTGCTCTCCAAACCTGCGAAGGGTGTTGAGAAAACCTTTCCTCTCCTCTCTCTCCTTCCAAAAATCCTTGTTGTTTACAAGGAAGTTATAGCTGATCTTAAGGCAGCTGGTGCTTCATGGATCCAGTTTGATGAACCAACCCTTGTTTTAGATCTTGATTCTCACAAGCTCCAAGCATTTACTGAAGCATACTCAGAGCTTGAATCTTGTTTATCTGGATTGAATGTCCTGATCGAGACCTACTTTGCTGATATTCCTGCTGATGCTTACAAGACCATCACTTCTCTCAAGGGCGTCACAGCCTATGGATTTGATCTTGTCCGTGGAACTCAGACCCTTAATTTGATCAAGGCTGGGTTTCCCAGCGGAAAGTACCTCTTTGCTGGAGTGGTTGATGGAAGGAACATCTGGGCTAATGATCTTGCTGCATCTCTAAGCTTACTTCATGATCTTGAGGGCATTGTCGGCAAAGACAAACTTGTTGTCTCCACTTCCTGCTCGCTTCTTCACACTGCTGTTGATCTTGTAAATGAGACCAAACTTGATGATGAAATCAAGTCATGGTTGGCTTTTGCTGCCCAGAAAGTTGTTGAAGTTAATGCATTGTCCAAGGCATTGTCTGGTGCAAAAGACGAGGCCTTCTTCTCTGCTAATGCCGCAGCTCTGGCTTCAAGGAAGTCCTCTCCAAGAGTTACCAATGAGGCTGTTCAGAAGGCTGTTGCTGCATTGAAGGGTTCTGACCACCGCCGTGCCACTAATGTCAGCGCCAGACTGGATGCTCAACAAAAGAAGCTTAACCTTCCAATCCTCCCAACCACCACTATTGGATCCTTCCCTCAGACTGTAGAGCTGAGGAGGGTACGCCGTGAATTCAAAGCTAACAAGATCACCGAGGAAGAGTATGTTAATTTCATTAGAGAAGAAATCCGCAAAGTTGTTGAACTCCAAGAAGAGCTTGATATCGATGTCCTTGTACATGGGGAACCAGAGAGAAACGATATGGTTGAGTACTTTGGTGAGCAGATGTCTGGCATTGCCTTCACTGTTAATGGGTGGGTGCAATCTTATGGATCTCGTTGCGTGAAGCCACCAATCATCTATGGTGATGTGAGCCGCCCAAAGGCTATGACTGTGTTCTGGTCATCTATGGCTCAGAGCATGACCAAGCGCCCAATGAAGGGAATGCTTACCGGTCCTGTCACCATTCTGAACTGGTCCTTCGTTAGAGTCGACCAGCCTAGATCTGAGACTACCTACCAGATTGCCTTGGCTATTAAGGAGGAAGTAGAAGATCTTGAGAAGGCCGGCATCAACGTGATCCAAATTGACGAGGCTGCTTTGAGAGAGGGATTGCCTCTGAGGAAGTCAGAGCAAGCTCACTACTTGGACTGGGCTGTCCACGCCTTCAGAATCACCAACGTTGGTGTGAAGGACACCACTCAGATCCACACCCACATGTGCTATTCCAACTTCAACGACATCATCCACTCAATCATTGACATGGATGCAGATGTGATCACCATTGAGAACTCTCGTTCCGATGAAAAGCTTCTTTCAGTGTTCCGTGAAGGAGTGAAGTACGGTGCCGGAATTGGCCCTGGTGTGTATGACATCCACTCTCCCAGGATCCCACCAACAGAGGAAATTGCCGATAGGATCAACAAGATGCTCGCAGTGCTGGAGAAGAACATCTTGTGGGTCAACCCCGATTGTGGGCTCAAGACTCGTAAGTACACTGAGGTGAAGCCAGCCCTCACCAACATGGTTGCTGCTGCCAAACTCATCCGCAATGAGCTCGCCTCTGCTAAGTGA 2367 0.4778 MALCFYPSLITEARTGLYTTERTMASHIVGYPRMGPKRELKFALESFWDGKSSAEDLKKVAADLRASIWKQMADVGIKYIPSNTFSFYDQVLDATALLGAVPPRYGWTGGEIGFDTYFSMARGNASVPAMEMTKWFDTNYHFIVPELGPDVNFSYASHKAVDEYKEAKALGVDTVPVLIGPVSYLLLSKPAKGVEKTFPLLSLLPKILVVYKEVIADLKAAGASWIQFDEPTLVLDLDSHKLQAFTEAYSELESCLSGLNVLIETYFADIPADAYKTITSLKGVTAYGFDLVRGTQTLNLIKAGFPSGKYLFAGVVDGRNIWANDLAASLSLLHDLEGIVGKDKLVVSTSCSLLHTAVDLVNETKLDDEIKSWLAFAAQKVVEVNALSKALSGAKDEAFFSANAAALASRKSSPRVTNEAVQKAVAALKGSDHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTVELRRVRREFKANKITEEEYVNFIREEIRKVVELQEELDIDVLVHGEPERNDMVEYFGEQMSGIAFTVNGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSMAQSMTKRPMKGMLTGPVTILNWSFVRVDQPRSETTYQIALAIKEEVEDLEKAGINVIQIDEAALREGLPLRKSEQAHYLDWAVHAFRITNVGVKDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPPTEEIADRINKMLAVLEKNILWVNPDCGLKTRKYTEVKPALTNMVAAAKLIRNELASAK 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0700 788 Gene3D - 28 548 IPR038071 -
Lele05g0700 788 SUPERFAMILY UROD/MetE-like 420 782 IPR038071 -
Lele05g0700 788 Hamap 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 24 783 IPR006276 GO:0003871|GO:0008270|GO:0009086
Lele05g0700 788 CDD CIMS_N_terminal_like 26 390 - -
Lele05g0700 788 PANTHER 5-METHYLTETRAHYDROPTEROYLTRIGLUTAMATE--HOMOCYSTEINE METHYLTRANSFERASE 24 788 - -
Lele05g0700 788 SUPERFAMILY UROD/MetE-like 26 418 IPR038071 -
Lele05g0700 788 TIGRFAM met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 29 782 IPR006276 GO:0003871|GO:0008270|GO:0009086
Lele05g0700 788 PIRSF Met_synth_MetE 23 788 IPR006276 GO:0003871|GO:0008270|GO:0009086
Lele05g0700 788 FunFam 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 418 781 - -
Lele05g0700 788 Pfam Cobalamin-independent synthase, N-terminal domain 26 338 IPR013215 GO:0003871|GO:0008270|GO:0008652
Lele05g0700 788 Gene3D - 413 781 IPR038071 -
Lele05g0700 788 CDD CIMS_C_terminal_like 456 779 IPR002629 GO:0003871|GO:0008270|GO:0009086
Lele05g0700 788 FunFam 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 28 417 - -
Lele05g0700 788 Pfam Cobalamin-independent synthase, Catalytic domain 455 778 IPR002629 GO:0003871|GO:0008270|GO:0009086
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0700 Lele-ChrLele05 4128255 4134632 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0700 05 4128255 4134632 Lele05g0700 05 4128255 4134632 ECH
Lele05g0700 05 4128255 4134632 Lele07g0741 07 4182026 4192030 hybridization
Lele05g0700 05 4128255 4134632 Lele08g0538 08 3256135 3259880 hybridization