Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0741 ATGCCTTCGGCGTGGTTCACAATAAATTTCGCCTTCGCTGTTGTACGCACACCGTCCTCAGTCATCCTCACCATCAACCTTAGTTACTGCCATGCCACTAATGCCAGATCTATTGGAAGTAAGACATCAGCATCGATGATTCAAGCTCTCTGCTTCTATCACTCCCTCATCAAAGAAGCCAGAACTGGTCTCTATTCACCCGAAAGAACAATGGCATCCCATATTGTCGGATATCCTCGCATGGGCCCCAAGAGAGAGCTCAAGTTCGCTCTGGAGTCATTCTGGGATGGGAAGAGCAGCGCTGAAGATTTGAAGAAGGTGGCTGCTGATCTCAGGGCATCAATCTGGAAGCAGATGGCTGGTGCTGGGATCAAATACATCCCCAGCAACACATTTTCTTTCTATGATCAGGTGCTTGATGCTACTGCCCTTCTTGGTGCTGTTCCACCCAGATATGGATGGACTGGTGGGGAGATTGGATTTGATACCTACTTCTCCATGGCCAGAGGTAATGCGTCAGTACCTGCAATGGAGATGACCAAATGGTTCGACACCAACTATCACTTTATTGTCCCTGAATTGGGACCTGATGTGAACTTCTCTTACGCTTCTCACAAAGCAGTGGACGAGTACAAGGAAGCCAAAGCTCTTGGAGTAGATACAGTTCCAGTCCTGATTGGTCCTGTCTCGTACTTGTTGCTCTCCAAACCTGCGAAGGGTGTTGAGAAAACCTTTTCTCTCCTCTCTCTCCTTCCAAAAATCCTTGCTGTTTACAAGGAAGTTATAGCTGATCTTAAGGCAGCTGGTGCTTCATGGATCCAGTTTGATGAACCAACCCTTGTTTTAGATCTTGATTCTCACAAGCTCCAAGCATTTACTGAAGCATACTCAGAGCTTGAATCTTCTTTATCTGGATTGAATGTCCTGATTGAGACCTACTTTGCTGATATTCCTGCTGATGCGTACAAGACCATCACTTCTCTCAAGGGTGTCACAGCCTATGGATTTGATCTTGTCCGTGGAACTCAGACCCTTAATTTGATCAAGGCTGGGTTTCCCATCGGAAAGTACCTCTTTGCTGGAGTGGTTGATGGAAGGAACATCTGGGCTAATGATCTTGCTGCATCTCTAAGCTTACTTCATGATCTTGAGGGCATTGTCGGCAAAGACAAACTTGTTGTCTCAACCTCCTGCTCGCTTCTTCACACTGCTGTTGATCTTGTAAATGAGACCAAACTTGATGATGAAATCAAGTCATGGTTGGCTTTTGCTGCCCAGAAAGTTATTGAAGTTAATGCATTGTCCAAGGCATTGTCTGGTGCAAAAGACGAGGCCTTCTTCTCTGCTAATGCCGCAGCTCTGGCTTCAAGGAAGTCCTCTCCAAGAGTGACCAATGAGGCTGTTCAGAAGGCTGTTGCTGCATTGAAGGGTTCTGAACACCGCCGTGCCACTAATGTCAGCGCCAGACTGGATGCTCAACAAAAGAAGCTTAATCTTCCAATCCTCCCAACCACCACTATTGGATCCTTCCCTCAGACTGTAGAGCTGAGGAGGGTCCGCCGTGAATTCAAAGCTAACAAGATCACCGAGGAAGAGTATGTTAATTTCATTAGAGAAGAAATCCGCAAAGTTGTTGAACTCCAAGAAGAGCTTGATATTGATGTCCTTGTACATGGGGAACCAGAGAGAAACGATATGGTTGAGTACTTTGGTGAGCAGATGTCTGGCATTGCCTTCACTGTTAATGGGTGGGTGCAATCTTATGGATCTCGTTGCGTGAAGCCACCAATCATCTATGGTGATGTGAGCCGCCCCAAGGCTATGACTGTGTTCTGGTCATCTATGGCTCAGAGCATGACCAAGCGCCCAATGAAGGGAATGCTTACCGGTCCTGTCACCATTCTGAACTGGTCCTTCGTTAGAGTCGACCAGCCTAGATCTGAGACTACCTACCAGATTGCCTTGGCTATTAAGGAGGAAGTAGAAGATCTTGAGAAGGCCGGCATCAACGTGATCCAAATTGACGAGGCTGCTTTGAGAGAGGGATTGCCTCTGAGGAAGTCAGAGCAAGCTCACTACTTGGACTGGGCTGTCCACGCCTTCAGAATCACCAACGTTGGGGTGAAGGACACCACTCAGATCCACACCCACATGTGCTATTCCAACTTCAACGACATCATCCACTCAATCATTGACATGGATGCAGATGTGATCACCATTGAGAACTCTCGTTCCGATGAAAAGCTTCTTTCAGTGTTCCGTGAAGGAGTGAAGTACGGTGCCGGAATTGGCCCTGGTGTGTATGACATCCACTCTCCCAGGATCCCACCAACAGAGGAAATTGCCGATAGGATCAACAAGATGCTCGCAGTGCTGGAGAAGAACATCTTGTGGGTCAACCCCGATTGTGGGCTCAAGACTCGCAAGTACACTGAGGTGAAGCCAGCCCTCACCAACATGGTTGCTGCCGCCAAACTCATCCGCAATGAGCTCGCCTCTGCTAAGTGA 2508 0.4781 MPSAWFTINFAFAVVRTPSSVILTINLSYCHATNARSIGSKTSASMIQALCFYHSLIKEARTGLYSPERTMASHIVGYPRMGPKRELKFALESFWDGKSSAEDLKKVAADLRASIWKQMAGAGIKYIPSNTFSFYDQVLDATALLGAVPPRYGWTGGEIGFDTYFSMARGNASVPAMEMTKWFDTNYHFIVPELGPDVNFSYASHKAVDEYKEAKALGVDTVPVLIGPVSYLLLSKPAKGVEKTFSLLSLLPKILAVYKEVIADLKAAGASWIQFDEPTLVLDLDSHKLQAFTEAYSELESSLSGLNVLIETYFADIPADAYKTITSLKGVTAYGFDLVRGTQTLNLIKAGFPIGKYLFAGVVDGRNIWANDLAASLSLLHDLEGIVGKDKLVVSTSCSLLHTAVDLVNETKLDDEIKSWLAFAAQKVIEVNALSKALSGAKDEAFFSANAAALASRKSSPRVTNEAVQKAVAALKGSEHRRATNVSARLDAQQKKLNLPILPTTTIGSFPQTVELRRVRREFKANKITEEEYVNFIREEIRKVVELQEELDIDVLVHGEPERNDMVEYFGEQMSGIAFTVNGWVQSYGSRCVKPPIIYGDVSRPKAMTVFWSSMAQSMTKRPMKGMLTGPVTILNWSFVRVDQPRSETTYQIALAIKEEVEDLEKAGINVIQIDEAALREGLPLRKSEQAHYLDWAVHAFRITNVGVKDTTQIHTHMCYSNFNDIIHSIIDMDADVITIENSRSDEKLLSVFREGVKYGAGIGPGVYDIHSPRIPPTEEIADRINKMLAVLEKNILWVNPDCGLKTRKYTEVKPALTNMVAAAKLIRNELASAK 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0741 835 FunFam 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 75 464 - -
Lele07g0741 835 Pfam Cobalamin-independent synthase, N-terminal domain 73 385 IPR013215 GO:0003871|GO:0008270|GO:0008652
Lele07g0741 835 FunFam 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 465 828 - -
Lele07g0741 835 Hamap 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 71 830 IPR006276 GO:0003871|GO:0008270|GO:0009086
Lele07g0741 835 Gene3D - 460 828 IPR038071 -
Lele07g0741 835 Pfam Cobalamin-independent synthase, Catalytic domain 502 825 IPR002629 GO:0003871|GO:0008270|GO:0009086
Lele07g0741 835 TIGRFAM met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 76 829 IPR006276 GO:0003871|GO:0008270|GO:0009086
Lele07g0741 835 SUPERFAMILY UROD/MetE-like 73 465 IPR038071 -
Lele07g0741 835 SUPERFAMILY UROD/MetE-like 467 829 IPR038071 -
Lele07g0741 835 CDD CIMS_N_terminal_like 73 437 - -
Lele07g0741 835 Gene3D - 75 595 IPR038071 -
Lele07g0741 835 CDD CIMS_C_terminal_like 503 826 IPR002629 GO:0003871|GO:0008270|GO:0009086
Lele07g0741 835 PANTHER 5-METHYLTETRAHYDROPTEROYLTRIGLUTAMATE--HOMOCYSTEINE METHYLTRANSFERASE 71 835 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0741 Lele-ChrLele07 4182026 4192030 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g0741 07 4182026 4192030 Lele07g0741 07 4182026 4192030 ECH
Lele05g0700 05 4128255 4134632 Lele07g0741 07 4182026 4192030 hybridization
Lele06g0533 06 3210194 3213904 Lele07g0741 07 4182026 4192030 hybridization