Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0684 ATGCAAGCGCACCTTCCCATCCCCATCTCTGGTCGTGATGGCGGGTTAAACTCCATCGTCGATTCCAATCTGTTCATCGCTGCGCAGCCCGGTCACAGGTGGAGCCCACTTATTGTAGCATCGTCTTCGGCTGCCGCATTCAACGGCGAGCAGAACCACTACGTCGTGTTGTGCCTTGAGCAGACTGCCATCACCGCTGATATCAAAAGGGCTCATCGCCTCCTCGCGCGCAAGTATCATCCTGATGTCAGCAAGGATTCGCAAGCTGCTGAATTGTTCAAGAGCATTCGTCGAGCATATGAAGTGAGCAATACCCCATTTACTTTTGTACTCTCCAATGAGGTAACAGGAAATCAGTATGATCGGTCTCTAAAATTTGCCCAGCAGCCTTACAGGAAGAAATGTAGTTACGACGCTGAATTTGATGATGAGATAAGAATGAACGAGTGGGCCAAAGTGAGGCAGAAAATGCACAATGAAGCATACTGGGACCATTACAACGTCAATGAGGGCTAG 516 0.4942 MQAHLPIPISGRDGGLNSIVDSNLFIAAQPGHRWSPLIVASSSAAAFNGEQNHYVVLCLEQTAITADIKRAHRLLARKYHPDVSKDSQAAELFKSIRRAYEVSNTPFTFVLSNEVTGNQYDRSLKFAQQPYRKKCSYDAEFDDEIRMNEWAKVRQKMHNEAYWDHYNVNEG 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0684 171 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 40 125 - -
Lele05g0684 171 SUPERFAMILY Chaperone J-domain 49 130 IPR036869 -
Lele05g0684 171 Gene3D DnaJ domain 49 164 IPR036869 -
Lele05g0684 171 PRINTS DnaJ domain signature 54 72 IPR001623 -
Lele05g0684 171 PRINTS DnaJ domain signature 88 108 IPR001623 -
Lele05g0684 171 PRINTS DnaJ domain signature 72 87 IPR001623 -
Lele05g0684 171 ProSiteProfiles dnaJ domain profile. 52 124 IPR001623 -
Lele05g0684 171 CDD DnaJ 52 102 IPR001623 -
Lele05g0684 171 SMART dnaj_3 51 116 IPR001623 -
Lele05g0684 171 Pfam DnaJ domain 52 102 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0684 Lele-ChrLele05 4030430 4032700 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0684 05 4030430 4032700 Lele05g0684 05 4030430 4032700 ECH
Lele05g0684 05 4030430 4032700 Lele07g0720 07 4071324 4073984 hybridization
Lele05g0684 05 4030430 4032700 Lele08g0518 08 3150498 3153428 hybridization