Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0720 ATGCAAGCGCACCTCCTGGTGGGACCCATCCCTATCGCTGGTTGTGGTGGCGGGTTAAACTCCATCGTCGATTCCAATCTGTTCATCGCTGCTCCGCCCAGCTGGAGTAACCGTCGGCGCCGGCGACTCCGCCCCGGTCACAGGTGGAGCCCACTTATTGTAGCATCGTCTTCGGCTGCCGCAATCAACGGCGAGCAGAACCACTACGTCGTGTTGGGCCTTGAGCAGACTGCCACCGCCGCCGATATCAAAAGGGCTTATCGCCTCCTCGCGCGCAAGGTTCGCTATTGCCTTCCTGCTGAAGTATTAGGGATTTGCGTGCTTTCACTTCCATCTAGCCTCGGAAAGTTTCTACGCAATCGGGCTGAAGCTTTATGCTTAAGGGATGAAAGATGGATTGACCTGGAAGTTGAGCGTGAATATAGAAACTGCAATGATCTGGGTTATCATCCTGATGTCAACAAGGATTCGCAAGCTGCTGAATTGTTCAAGAGCATTCGTCGAGCATATGAAGTACTCTCCAATGAGGTAACAAGAAATCAGTATGATCGGTCTCTAAAATTTGCCCAGCAGCCTTACAGGAAGAAATGTAGTTACGACACTGAATTTGATGATGAGATGAGAATGTATAAGTGGGCCAAAGTGAGGCAGAAAATGCACAATGAAGCATACTGGGACCACTACAACGTCAATGAGGGCTACTATAACAGCAGTGAAACAGAGGAAGAAGATGAGGATGATGAAGAAGAAAAATTAGAAGAGAGAGGTTCCTTCATAGAAGTTCTGAAATCTGCATTCATGTCACTGCTATTGTTCCAAACATTTGGATACCGACTGTCCCTCACATTTAGCAGCCTAATGGCATTGCTCAACAGAAAGCTAGATACTGGCTACAAAATCGGCTATGTAATGGCATGGACTCTGGAAGAACCTAATGGCATTGCTCGACAGAAAGCTAGATACTGGCTACAAAATCGGCTATGTAATGGCATGGATTCTGGGCGGTAG 1008 0.4792 MQAHLLVGPIPIAGCGGGLNSIVDSNLFIAAPPSWSNRRRRRLRPGHRWSPLIVASSSAAAINGEQNHYVVLGLEQTATAADIKRAYRLLARKVRYCLPAEVLGICVLSLPSSLGKFLRNRAEALCLRDERWIDLEVEREYRNCNDLGYHPDVNKDSQAAELFKSIRRAYEVLSNEVTRNQYDRSLKFAQQPYRKKCSYDTEFDDEMRMYKWAKVRQKMHNEAYWDHYNVNEGYYNSSETEEEDEDDEEEKLEERGSFIEVLKSAFMSLLLFQTFGYRLSLTFSSLMALLNRKLDTGYKIGYVMAWTLEEPNGIARQKARYWLQNRLCNGMDSGR 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0720 335 SUPERFAMILY Chaperone J-domain 59 94 IPR036869 -
Lele07g0720 335 SMART dnaj_3 66 178 IPR001623 -
Lele07g0720 335 CDD DnaJ 67 175 IPR001623 -
Lele07g0720 335 ProSitePatterns Nt-dnaJ domain signature. 163 182 IPR018253 -
Lele07g0720 335 ProSiteProfiles dnaJ domain profile. 67 186 IPR001623 -
Lele07g0720 335 PRINTS DnaJ domain signature 69 87 IPR001623 -
Lele07g0720 335 PRINTS DnaJ domain signature 158 178 IPR001623 -
Lele07g0720 335 PRINTS DnaJ domain signature 142 157 IPR001623 -
Lele07g0720 335 Coils Coil 235 255 - -
Lele07g0720 335 Gene3D DnaJ domain 129 266 IPR036869 -
Lele07g0720 335 SUPERFAMILY Chaperone J-domain 147 188 IPR036869 -
Lele07g0720 335 Pfam DnaJ domain 136 183 IPR001623 -
Lele07g0720 335 Gene3D DnaJ domain 54 95 IPR036869 -
Lele07g0720 335 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 47 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0720 Lele-ChrLele07 4071324 4073984 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g0720 07 4071324 4073984 Lele07g0720 07 4071324 4073984 ECH
Lele05g0684 05 4030430 4032700 Lele07g0720 07 4071324 4073984 hybridization
Lele06g0511 06 3103742 3106652 Lele07g0720 07 4071324 4073984 hybridization