Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0518 ATGCAAGCGCACCTTCTGGTGGGTCCCATCCCCATCGCTGGTTGTGGTGGCGGGTTAAACTCCATCGTCGATTCCAATCTCTTCATCGCTGCTCCGCCCAGCTGGACTAACCGTCGGCGCCGGCGACTTCGCGGTCACAGGTGGAGCCCACTTATTGTCGCATCGTCTTCGGCTGCCGCAATCAACGGCGAGCAGAACCACTACGTCGTGTTGGGCCTTGATCAGACTGCGACCGCCGCTGATATCAAAAAGGCTTATCGCCTCCTCGCTCGCAAGTATCATCCTGATGTTAGCAAGGATTCACAAGCTGCTGAATTGTTTAAGAGCATTCGTCGAGCATATGAAGTACTCTCCAATGAGGTAACAAGAAATCAGTATGATCGATCTCTAAAATTTGCCCAGCAGCCTTACAGGAAGAAATGGAGTTACAACACTGAATTTGATGATGAGATAAGAATGTATAGGTGGGCCAAACTGAGGCAGAAAATGCATAATGAAGCATACTGGGAGCATTACAACGTCAATGAGGGCTACGATAACAGCAGTGAAACAGAGCAGGAAGAGGAGGAGGATGAAGAAGAAAAATTACAAGAGAGAGGTTCCTTCATAGAAGTTCTGAAATCTGCATTCATGTCACTGCTATTGTTCCAAACATTTGGATCTCGACTGTCCCTCACATTTAGCAGTCTAATGGCATTGCTCGACAGGAAGCTAGATACTGGCTACAAAATTGGTTATGTAATGGCATGGATTCTGGGTGGTAGGGGTGGCATATTGCTAACATTATGCTTGTCATTTGCAAGTTGGGTTTGTGGGAAAACCAGTAGTAGTTTAGTTTCACTAGTGGTTGTAGCCATGTGGGTTGGGTCCTATCTTGCAAGGTATGCCCCTCTTCCCCAAGGGGCTTTGCTAACTCTTATCTACATGTCCATTAAGCTCCAATCTGATCTATAA 954 0.4696 MQAHLLVGPIPIAGCGGGLNSIVDSNLFIAAPPSWTNRRRRRLRGHRWSPLIVASSSAAAINGEQNHYVVLGLDQTATAADIKKAYRLLARKYHPDVSKDSQAAELFKSIRRAYEVLSNEVTRNQYDRSLKFAQQPYRKKWSYNTEFDDEIRMYRWAKLRQKMHNEAYWEHYNVNEGYDNSSETEQEEEEDEEEKLQERGSFIEVLKSAFMSLLLFQTFGSRLSLTFSSLMALLDRKLDTGYKIGYVMAWILGGRGGILLTLCLSFASWVCGKTSSSLVSLVVVAMWVGSYLARYAPLPQGALLTLIYMSIKLQSDL 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0518 317 Coils Coil 179 199 - -
Lele08g0518 317 CDD DnaJ 66 119 IPR001623 -
Lele08g0518 317 PRINTS DnaJ domain signature 102 122 IPR001623 -
Lele08g0518 317 PRINTS DnaJ domain signature 86 101 IPR001623 -
Lele08g0518 317 PRINTS DnaJ domain signature 68 86 IPR001623 -
Lele08g0518 317 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Lele08g0518 317 SUPERFAMILY Chaperone J-domain 63 137 IPR036869 -
Lele08g0518 317 Pfam DnaJ domain 66 127 IPR001623 -
Lele08g0518 317 Gene3D DnaJ domain 53 151 IPR036869 -
Lele08g0518 317 SMART dnaj_3 65 122 IPR001623 -
Lele08g0518 317 FunFam Uncharacterized protein 63 213 - -
Lele08g0518 317 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Lele08g0518 317 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 48 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0518 Lele-ChrLele08 3150498 3153428 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g0518 66 131 Miscellaneous Gene Families AT1G16680 47.826 6.86e-08 52.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g0518 08 3150498 3153428 Lele08g0518 08 3150498 3153428 ECH
Lele05g0684 05 4030430 4032700 Lele08g0518 08 3150498 3153428 hybridization
Lele06g0511 06 3103742 3106652 Lele08g0518 08 3150498 3153428 hybridization