Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g1690 ATGGGTCCCACCATCAATCAATGCCCACCTCCCAACTTGCCCCTCGAAAATAATGGAACCAAACCCCGTGAGAGAGAAACAGTAAACGCTTTGGAGTTTATAGAGAGAGAAAGACAGCAAGCTAAGAAGGAGAGAGAGAGAGAGAGCAAAAAAAAAAATCCACCCATCAAAGAACAAAAAAGCGAGCTGAGTCGCAGATCGTCGGCCATGGGTCAGATCGTGAGGAGGAAGAAGAAGGGACGCCCTTCCAAGGCCTTTCTAGCTCACCGCTCCGGCGAATCTCCCGCTCCCCCTCAGCCCGACCTCCGCCGCAGCCTCCGCCGACGAAATGTGAGGTACAACATCGAGTATGACGACTACCTCGACGAGGACGACGAGGACGAGGACGAGGATGAGAGGAGGAGGGAGAAGAAGCTCAAGTTAGTTGTGAAGCTGAACCAGGATAGGGATGGGGACGACGACGAGTCGGCGCCCAGTCGCACGCGCGGCGAGGCGCGTGGGAGCCACTCGCGGGATTCTTCGGAGGAGGACGAGGGCGAAAGGAAGCCCTTGAAGAAGAGAAGGATAAGCGGCGGCAGGGTTGGAAATGAAGACGGCGAGGAGGAGGAGGAGGAGGAGGAAGAAGGAAGGGAAGATAATGACGAAGAAAACGAAAACGAGGAAGATGAGAATCTCCGAGACCATAATGATGATGATGATGGTGTGGTAAAAGGCAGAAAAGCGGATTCGAAAGGGCTCCACCCTCTTTCAGTGACTCCGAGAAAATCTTCATCTGGAATTCCGTTGCCTGATAAGAGGACATTGGAGTTGATCCTTGACAAACTTCAAAAGAAGGATACATATGGTGTGTATGCGGAACCTGTTGATCCGGAAGAGCTTCCTGATTATCACGATGTGATTGAGCATCCAATGGACTTTGCCACAGTGCGAAAGAAGCTAGCTAGTGGATCATATCCTACCTTCGAACAATTTGAGAGTGATGTATTTTTAATATGCACAAATGCAATGCAGTACAATTCACCAGAAACTATATACCACAAACAGGCACGATCAATGCAAGAATTAGCACGGAAGAAGTTTGAGAAGTTAAGGGTTGACTTAGAACACTCACAAGGTGAGCAGAAATCAGACCAAAAAGCAAGATCAAATTCCTTGGGCAAGAAGCTGACAAAGAAGCCAGTTGGTCATGCCTCACAGGAACCCGTTTGCTCTGATTTCTCGGCAGGTGCAACTCTTGCTACCATTGGAGATGTACTGCCAACTTCACACCCTATCCCAGGTGGCAGCTGTGAGAGGCCTTGCAACAATGATGGCCTTGCCGATGTTAATGGTTTCATAATCGATGCAAATCAAGAAAAAGCAGAAGATTTTTTATCAGGGAAGAGCCTGCTCTCTAAGTTGGGAAGAAAGCCTTTTGCTCTTGATGATAATCGTCGTGGAACTTATAATGCTTCTATTCAACCAGTTGGCAGATCGGATTCTGTTCTCATGACATTTGAGAGTGAAATTAAGCAGCTGGTTACCGTTGGTCTTCATACTGAATATTCCTATTCTCGGAGTTTAGCTCGTTTTGCTGCAACTTTAGGGCCTGCTGCTTGGAAAATTACTTCCCGGAGAATTCAGCATGCACTTCCAAGTGGCTGCAAATTTGGTCGTGGTTGGGTTGGAGAGTATGAACCACTTCCAAGACCAGTAATAATGCTTGATCATCGAATCCATAAAGAACCCAGCTTTGTTTCAAAGTTTCAGTCTACTGAATCTGGAAAGGGTGACAAAAATGGGAAGACTTCAGAATCTCCCGTGGATAACAATGTTCATGGACTCGTGTTAGAGGGTAAACAGCCTTCGACTGATCCTGCTAGTAGACCTGCCTCAGAAGGAAAACCATCTCTGTTTGGCTCTGCTGGAATAAGACCCAATGCTCCAGTCAATGCTCCGGCCAATGTCCTTTATCAACAACAGAATGTTCAACCCAGGAATTCTGGCAAGCCTGAGAATAAAGGTTTGAAACATGTGGAGTTGAACTCTTTGCCCTCTAGTAATCAGAATAATGCCAATCTTGGCACAAAGTTTTTAAGTAATGCTCCTCCAGGAGCGTCTAAGCCTAGAGAAATGGTGCCTAGGAACACGAATGTATCGCCTCCTGTACCTTTCAAGGAGCCAGAAACTAATGGAGTTGCAGGTGGAGATTTACCTAATGGAAAAGTCCCAAATTCTAGTCTGAATAGACGGCCAACTGGACCACCCTCTGAAAGTACATCAAATCAAAGTGGTAGAGCTGGGCCTTTTGTGCCCCATGGGCAAGATCAGAGTCTTGCTGACCCAGTTCAGCTGATGAGGATGTTAGCTGAAAAGGCTCAGAAGCAACAAGCTTCTTCTAATCCTTCTCCCATCGATACTCCTCCTATGATGCCATCAGTTTCATCAGGACGGAGGGATGACTTGGGCAATGCTGCCGCGGCAGCTGCCCGTGCATGGATGTCTGTGGGAGCAGGAGGATTTAAGCAAGGAACTGATAATTCCAGTTCACCCAAAAACCAGATTTCTGCTGAATCTTTATACAACCCATCACGAGAGTTCCATCAACATATTCCGCGAACAAGGGGGGAGTTCCCTTCTGGCGGAATGCCTTTCCAGCCTGAGAAGAACAACTTTCCTTTTCAGGCTCTAGTATCTCAACCAATTCACCCAGGCAGCATTTCGCAGTTTCCAAACCGACCTATGGTTTTCCCTCAATTAGCAGCTACTGATCTATCCAGATTTCAAATGCAGTCTGCTTGGGAAGGTCTTAGTCCACATGGCCAACCAAAGCAAAAACCAGAAACCCTTCCTCCCGACTTGAATATCGGCTTCCAATCTCCAGGGTCCCCTGCAAAACAATCTTCTGGTGTGATGGTTGACTCACAGCAACCAGACCTGGCCCTACAACTATGA 2934 0.4748 MGPTINQCPPPNLPLENNGTKPRERETVNALEFIERERQQAKKERERESKKKNPPIKEQKSELSRRSSAMGQIVRRKKKGRPSKAFLAHRSGESPAPPQPDLRRSLRRRNVRYNIEYDDYLDEDDEDEDEDERRREKKLKLVVKLNQDRDGDDDESAPSRTRGEARGSHSRDSSEEDEGERKPLKKRRISGGRVGNEDGEEEEEEEEEGREDNDEENENEEDENLRDHNDDDDGVVKGRKADSKGLHPLSVTPRKSSSGIPLPDKRTLELILDKLQKKDTYGVYAEPVDPEELPDYHDVIEHPMDFATVRKKLASGSYPTFEQFESDVFLICTNAMQYNSPETIYHKQARSMQELARKKFEKLRVDLEHSQGEQKSDQKARSNSLGKKLTKKPVGHASQEPVCSDFSAGATLATIGDVLPTSHPIPGGSCERPCNNDGLADVNGFIIDANQEKAEDFLSGKSLLSKLGRKPFALDDNRRGTYNASIQPVGRSDSVLMTFESEIKQLVTVGLHTEYSYSRSLARFAATLGPAAWKITSRRIQHALPSGCKFGRGWVGEYEPLPRPVIMLDHRIHKEPSFVSKFQSTESGKGDKNGKTSESPVDNNVHGLVLEGKQPSTDPASRPASEGKPSLFGSAGIRPNAPVNAPANVLYQQQNVQPRNSGKPENKGLKHVELNSLPSSNQNNANLGTKFLSNAPPGASKPREMVPRNTNVSPPVPFKEPETNGVAGGDLPNGKVPNSSLNRRPTGPPSESTSNQSGRAGPFVPHGQDQSLADPVQLMRMLAEKAQKQQASSNPSPIDTPPMMPSVSSGRRDDLGNAAAAAARAWMSVGAGGFKQGTDNSSSPKNQISAESLYNPSREFHQHIPRTRGEFPSGGMPFQPEKNNFPFQALVSQPIHPGSISQFPNRPMVFPQLAATDLSRFQMQSAWEGLSPHGQPKQKPETLPPDLNIGFQSPGSPAKQSSGVMVDSQQPDLALQL 977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g1690 977 MobiDBLite consensus disorder prediction 197 228 - -
Lele04g1690 977 ProSiteProfiles Bromodomain profile. 276 346 IPR001487 GO:0005515
Lele04g1690 977 Pfam Bromodomain 270 350 IPR001487 GO:0005515
Lele04g1690 977 MobiDBLite consensus disorder prediction 19 64 - -
Lele04g1690 977 ProSitePatterns Bromodomain signature. 282 338 IPR018359 -
Lele04g1690 977 SUPERFAMILY Bromodomain 248 363 IPR036427 GO:0005515
Lele04g1690 977 MobiDBLite consensus disorder prediction 675 693 - -
Lele04g1690 977 MobiDBLite consensus disorder prediction 367 384 - -
Lele04g1690 977 MobiDBLite consensus disorder prediction 131 196 - -
Lele04g1690 977 Coils Coil 103 123 - -
Lele04g1690 977 MobiDBLite consensus disorder prediction 102 117 - -
Lele04g1690 977 PANTHER BROMODOMAIN CONTAINING PROTEIN 75 976 - -
Lele04g1690 977 MobiDBLite consensus disorder prediction 229 244 - -
Lele04g1690 977 MobiDBLite consensus disorder prediction 367 400 - -
Lele04g1690 977 MobiDBLite consensus disorder prediction 675 770 - -
Lele04g1690 977 MobiDBLite consensus disorder prediction 784 811 - -
Lele04g1690 977 MobiDBLite consensus disorder prediction 953 977 - -
Lele04g1690 977 MobiDBLite consensus disorder prediction 579 640 - -
Lele04g1690 977 CDD Bromodomain 264 360 - -
Lele04g1690 977 Gene3D - 263 384 IPR036427 GO:0005515
Lele04g1690 977 PRINTS Bromodomain signature 327 346 IPR001487 GO:0005515
Lele04g1690 977 PRINTS Bromodomain signature 309 327 IPR001487 GO:0005515
Lele04g1690 977 PRINTS Bromodomain signature 293 309 IPR001487 GO:0005515
Lele04g1690 977 MobiDBLite consensus disorder prediction 735 761 - -
Lele04g1690 977 MobiDBLite consensus disorder prediction 1 262 - -
Lele04g1690 977 Coils Coil 199 223 - -
Lele04g1690 977 Coils Coil 24 51 - -
Lele04g1690 977 MobiDBLite consensus disorder prediction 929 977 - -
Lele04g1690 977 SMART bromo_6 257 365 IPR001487 GO:0005515
Lele04g1690 977 MobiDBLite consensus disorder prediction 71 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g1690 Lele-ChrLele04 21545338 21550424 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g1690 04 21545338 21550424 Lele04g1690 04 21545338 21550424 ECH
Lele01g1419 01 8726687 8736326 Lele04g1690 04 21545338 21550424 hybridization
Lele02g1707 02 20628215 20633057 Lele04g1690 04 21545338 21550424 hybridization